Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0312 |
Symbol | |
ID | 7308223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 353875 |
End bp | 355077 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643598093 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002495659 |
Protein GI | 220920358 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.17056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGACG ATCAATCCGG CGCGGAGCAC CGCGACGGGC GGAGTCCCGA TGCGCCGGCG GCGAGGAACC GGGCCGACCT GCCTCGCTCC CACGACGCGA CCCCCTCCCC GGACCGGGAG CCGGAGCGGA CGGGTTCGTC CCGGGACGGC CGAGGCGGCC GGGGCGAGAA GACGCCGTCG CCGATCCGCC GCCACCCGGT CTGGTTCGCC CTCGGCGCGA TCCTGCTCGT CGCCACGGGG GCGGCGGGCT TCTGGTACTG GCTCGTCTTC GTGCACCCCT ACGAGTCCAC GGACGACGCC TTCGTGGCCG CCCGCCAGTT CTCGGTCGCC CCGAAGGTCT CGGGCTACGT CGTGGCCGTG CCGGTCACCG ACAACCAGCA CGTCGAGGCC GGCAGCGTCC TGTTCCAGAT CGACCGGCGC GACTACGCGG CCGCCCTCCG GGAGGCGCAG GCGCAGGTCG CCTCGGCCGA GGCCGCGATC CGCAACATCG ACGCGCAGAT CGAGGCCCAG AGGGGCAGCA TCGCGGAGGC CGAGGCGCAG GTCGAGCAGG CCGATGCCGC CCTCGCCTTC GCCCGCCAGG AGGCTGCCCG CTACCAGGAC CTCGCCCAGC GCGGCGCGGG CAGCATCCAG CAATCCCAGC AATCGACCTC GAACCTGCAG CAGCAGCAGG CCAACCTGTC CCGCGCCCGC GCCGCCGTGA CCGTGGCGCA GAAGCAGGTC GGCTCGCTGC AGGCCCAGCG GGCCGGCGCC GAGGCGAGCC TCGCCCAGGC GCGCGCCCAG GAGGAGCAGG CGAGGCTCAA CCTCGGCTAT ACGACCGTGA CGGCGGCCCA GGCCGGCCGG GTGGTCCGCC TCACCGGAGC GGTCGGCCAA TACGCGCAGG CCGGCCAGGC GCTCGGCATG TTCGTGCCCG ACGACATCTG GATCACCGCG AACTTCAAGG AAACCCAGAT CACCGACATG CGGCCGGGCC AGGACGTCGA TGTCGAGATC GACGCCTACC CGGATCGCAC GATCAAGGGC CGCGTCGAGT CCGTGCAGCC GGGCTCGGGA ACCGCTTTCA GCCTGCTCCC GGCCGAGAAC GCCACGGGCA ACTTCGTGAA GGTGGTGCAG CGCGTGCCGG TGAAGATCGT GGTCGACCAC TGGCCGGAGG ACGTCGCGAT CGGGCCCGGC CTGTCCGTCG TGCCGACGGT GCGGGTGCGG TGA
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Protein sequence | MLDDQSGAEH RDGRSPDAPA ARNRADLPRS HDATPSPDRE PERTGSSRDG RGGRGEKTPS PIRRHPVWFA LGAILLVATG AAGFWYWLVF VHPYESTDDA FVAARQFSVA PKVSGYVVAV PVTDNQHVEA GSVLFQIDRR DYAAALREAQ AQVASAEAAI RNIDAQIEAQ RGSIAEAEAQ VEQADAALAF ARQEAARYQD LAQRGAGSIQ QSQQSTSNLQ QQQANLSRAR AAVTVAQKQV GSLQAQRAGA EASLAQARAQ EEQARLNLGY TTVTAAQAGR VVRLTGAVGQ YAQAGQALGM FVPDDIWITA NFKETQITDM RPGQDVDVEI DAYPDRTIKG RVESVQPGSG TAFSLLPAEN ATGNFVKVVQ RVPVKIVVDH WPEDVAIGPG LSVVPTVRVR
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