Gene Mnod_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0183 
Symbol 
ID7304502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp196165 
End bp197046 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID643597959 
Productdiaminopimelate epimerase 
Protein accessionYP_002495532 
Protein GI220920231 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCTC TCGCGCATCG CCGGTTCCTG AAGATGAACG GCCTCGGCAA CGAGATCGTG 
GTGCTCGACC TGCGCGGCAC GCCCCACATC GTGCAGCCGC AGGAGGCGCG GGCGATCGCG
GCCGATCCGC GCTCGCGCTT CGACCAGTTG ATGGTGCTGC ACGATCCCGT CACGGCCGGG
ACCGACGCGG CGTTGCGCAT CTACAACACG GACGGCTCGG AATCCGGCGC CTGCGGCAAC
GGCACGCGCT GCGTCGCCTG GGCGATGCTG GAGGACCCCG TGATGGGGCG CCCGGCCGAG
CGCCTGACCC TTCAGAGCCG GGCGGGGCTT CTCGCCGTCA CGCGCGTCTC GGCCACCGAC
TTCACCGTCG ATATGGGGCC GCCGCGGCTG CGCTGGGACG AGATCCCGCT TGCGGAGCCT
TTTCCGGACA CGCGGCGGAT CGAGCTGCAG ATCGGCCCGA TCGACGATCC GATCCTGCAT
TCGCCCGGGG TCGTCAGCAT GGGCAACCCG CACGCGGTGT TCTTCGTCGA CCGCGACCCG
GCGAGCTACG ATCTCGCCCG CATCGGCCCG CTGCTCGAAG CCCATCCGAT CTTCCCGGAG
CGCGCCAACA TCTCGGTCGC GCAGGTGCGG GGCCCCGAGC ACATCGTCCT GCGGGTCTGG
GAGCGCGGCG CCGGACTCAC CCGGGCCTGC GGCTCGGCGG CCTGTGCGGC GCTGGTGGCC
GCCGCCCGCC TGCGCCTCAC CGGGCGCCGT GCCGTGGTGA CGCTGCCGGG CGGCGATCTC
GTCATCGACT GGGGCGAGGA CGACCACGTC CGCATGACCG GCCCGACCGA ACTCGAATGG
GAGGGCACGC TCGCGCCGTC CCTGTTCGCC GGGGCCGCCT GA
 
Protein sequence
MSPLAHRRFL KMNGLGNEIV VLDLRGTPHI VQPQEARAIA ADPRSRFDQL MVLHDPVTAG 
TDAALRIYNT DGSESGACGN GTRCVAWAML EDPVMGRPAE RLTLQSRAGL LAVTRVSATD
FTVDMGPPRL RWDEIPLAEP FPDTRRIELQ IGPIDDPILH SPGVVSMGNP HAVFFVDRDP
ASYDLARIGP LLEAHPIFPE RANISVAQVR GPEHIVLRVW ERGAGLTRAC GSAACAALVA
AARLRLTGRR AVVTLPGGDL VIDWGEDDHV RMTGPTELEW EGTLAPSLFA GAA