Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4378 |
Symbol | |
ID | 5364716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4975058 |
End bp | 4975879 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640806784 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001343208 |
Protein GI | 152998373 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.735178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAATA AATTGCGAAA TACAGACAAA ACCATTTTTG AATCCCTTAC CGACCTTTGC TTTGCTGATC ACTATCCGCA TCGTGTTTTG GTATTGCGTT CCCAATCGGT ACCGCACAGT GAAGAAACGC CTTGGCATCA TCATCAAAAA GGCCAGCTTG TCTTGCCTTT AACTGGCGTA GTGACCAGTT TTATCGATGA CAAAATGTGG CTTGTGCCAC CGCGTTGCGC AGTTTGGATT CCCAGCAATG TCATGCATCG TAATCAGATT TCGCCGAATG CTGATGTTTG TATGCTCTTC GTCGACAGCA CCAATTTAGC TTTGCCAGAG ATCACTTGTA CCTTGACGAT CACGCCTTTT GTCCGCGAGT TGATACTGCA CCTGCATACG CAGCAAGATT ACGAAAAAAC CGATCCGGCA ACCGGTCGAC TCGTCGATGT CTTGCTCGAC CAACTGATTC AACTAGAGCG AGAAGAGTTT GATTTCCCTA TCCCTGACGA ACCCACACTG AATCGCTTGG CATTGGAACT CATCGCCCGA CCCAACGAAA AACGTACCTT AGGTGAATGG GCCAGCGATT TCGCCATGAG CGAACGCACC TTAGCCCGTA TGATCAAACG CCACGTACAA CTGACCTTTG GTCAATGGCG CAGTCAGCTG CACATCGTCT TGGCCTTGCA AAAACTCGCC ATCAATCTGC CCATTCAAAC CATCTCCGAA GAACTCGGCT ACGACTCTGT CAGCGCTTTT ATCACCTTCT TTAAAAAAGC ATTGGGCAAA TCTCCAAGAC AATATCGGAT TGAGAGATGG GGGAGGGAGT GA
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Protein sequence | MDNKLRNTDK TIFESLTDLC FADHYPHRVL VLRSQSVPHS EETPWHHHQK GQLVLPLTGV VTSFIDDKMW LVPPRCAVWI PSNVMHRNQI SPNADVCMLF VDSTNLALPE ITCTLTITPF VRELILHLHT QQDYEKTDPA TGRLVDVLLD QLIQLEREEF DFPIPDEPTL NRLALELIAR PNEKRTLGEW ASDFAMSERT LARMIKRHVQ LTFGQWRSQL HIVLALQKLA INLPIQTISE ELGYDSVSAF ITFFKKALGK SPRQYRIERW GRE
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