Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3213 |
Symbol | |
ID | 5364928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3642557 |
End bp | 3643303 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640805583 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001342056 |
Protein GI | 152997221 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTG AGTTTAAGAG CAAAGCAAAA CGAAAAATAT CTGATCTAAT TGTCGATGAG GTTAAACGCC TAATTGTTTT CGAAAAACTA AACCCTGGCG ATCGTCTCCC GAGTGAAAAG GACTTAATAG AGCAATACGA AGTATCAAAA GGAACGGTGA GAGAGGCGAT GAAAGCCTTA GAGGTTGAGG GGTTAATAAA AACAAAACCA GGTCCTGGTG GCGGCGCTTG GTTGACCGAA GTGGGAACTG AACCGGCTAG TAGAGCGTTA AGAAATTACC TCTATTTTCG TCACATAAGC CCAAAACAAC TTTATCAAAT GAGAAAACTC ATAGAAGTAG AATTGGCAGT GTCGGTAGTT GGTTATCTCT CTGATGAAGA CCTTTTGTTA CTAAGAAAAT ATACCGATCA ATGTAATCTA AAACCGACCT CGGAAGATGA ACAGCGGTTA CAAAGAATAG CTGAACTAGA ATTCCATAAT GTTCTTGCTG ATGCCTCCCC TAATCCAATT TTAGGTTTCT TTGCACGCTT TCTAAACGAG TCTCTCAGGG ATCTTGTGGT TCTAAAAAAA TCTTATTTAA TCGATTACTA CGAGTTCACT AAGTCAAATG TTGACTACCA CTACGCACTA ATAAATGCCT ATGAAAAACA AGATATAAAA CAGGTACGCA CACTTATGTC AGAACATATG TGTGATGCTG AAACACACTT TATCGTATTA GATGGAGAGA TTTCTAAGAA AATGTAG
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Protein sequence | MATEFKSKAK RKISDLIVDE VKRLIVFEKL NPGDRLPSEK DLIEQYEVSK GTVREAMKAL EVEGLIKTKP GPGGGAWLTE VGTEPASRAL RNYLYFRHIS PKQLYQMRKL IEVELAVSVV GYLSDEDLLL LRKYTDQCNL KPTSEDEQRL QRIAELEFHN VLADASPNPI LGFFARFLNE SLRDLVVLKK SYLIDYYEFT KSNVDYHYAL INAYEKQDIK QVRTLMSEHM CDAETHFIVL DGEISKKM
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