Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3118 |
Symbol | |
ID | 5367448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3532518 |
End bp | 3533498 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640805490 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001341963 |
Protein GI | 152997128 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000342277 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATAA TAAAGACAAA AATAATTCAA TGTGCAGCTT TAACTACTCT CGCCCTTTCA CCGCTGGCTC TAGAGGCTAA AACTATTAAC CTCGCTTTTA CCCAAACGAT GGATTCACAA TATGGTGCGG CCGGTAATGC TTTCAAATCA GAACTGGAAA AGCTAAGTGA CCATAAAATT GAAGTCGATT TGAAGCCTGC GGGTGCTTTG GGTGGTGAAC GTGAAGTAGT TGAGAGTCTG CAGCTAGGCA TTATTGAAAT GACTATTTCT TCAACGGGGC CTTTAGGAAA CTTTGATAAA GATGTTTATC TGTTTGATTT TCCTTATGTA TTTGAAAGTT ACGATCATGC ACATCGCGTA CTAGATAGTC ATATAGGAAA GGATATTCTT GACGGAATGT CAGAGCATCA GATTAAAGGT TTGGCTTGGG GGGAAAATGG ATTCCGCCAG CTTACTTATA ATGGTGACCC GATCTTGAAG CCTGAAGATC TTAAGGGTAA AAAGATCAGA ACGATGGAAA ACTGGGTTCA TTTAGCGACA TTTAATGCGT TAGGTGCTTC GCCAATACCA ATGTCTTGGA CGGAAGTGTT CACTGCACTT CAACAAGGAA CGATTGATGG TCAAGAAAAT CCGATCAATC TTGCGGTAAC ATCAAAGCTT TATGAAGTTC AAAAGCAAGC CTCTATGACT CAGCACCTCT ATAGTCCAGC TGTTATTGCT ATGTCTCAGG GATATTGGGA TGGACTTAAC TCAAATGAGC AAAAGTGGGT TCAGCAAGCG GCCGATGTTG CTGCTAAGGT GATGCGTCAG TCGCGCGAGA AACTTGAAAA TGAAGCTTCA GATCAGTTGA CTCAAAAAGG TATGACTATT CATAAAGTGG ATATAGCACC TTTTGTAAAA GCTACCGAGG GTGTTCGTAA TAAGATCGCT AAGGAAATGG AATTTACTGA GAAGCTAGCT GAAATAAAAA GTATGAAATA A
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Protein sequence | MNIIKTKIIQ CAALTTLALS PLALEAKTIN LAFTQTMDSQ YGAAGNAFKS ELEKLSDHKI EVDLKPAGAL GGEREVVESL QLGIIEMTIS STGPLGNFDK DVYLFDFPYV FESYDHAHRV LDSHIGKDIL DGMSEHQIKG LAWGENGFRQ LTYNGDPILK PEDLKGKKIR TMENWVHLAT FNALGASPIP MSWTEVFTAL QQGTIDGQEN PINLAVTSKL YEVQKQASMT QHLYSPAVIA MSQGYWDGLN SNEQKWVQQA ADVAAKVMRQ SREKLENEAS DQLTQKGMTI HKVDIAPFVK ATEGVRNKIA KEMEFTEKLA EIKSMK
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