Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1208 |
Symbol | |
ID | 5366540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1350913 |
End bp | 1352322 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803547 |
Product | ImpA domain-containing protein |
Protein accession | YP_001340072 |
Protein GI | 152995237 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.413651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTA ATCTTATTCG AACATCGATT CGTGAGCCTA TATCCACTGA TCAGCCTGTT GGCGAAAGCG CTATTCATGA TCCGCTTTAT GAGTTTGTGG ATGATCAAAT GATGAAGGTT GGCTCTTTGT CTCATGGTTC AGTGCAATGG AAAAAAGCAG AAGAGTCGCT AATTGAACTG CTGAGTAAAA AAACCAAGGA TCTAAAACTG CTGACGTATT TTTTTCAATG CCTACACAAT AAAAATACAC CAGATAGTTT AACTTTATCC ATTTTCGTTT TAGCCGATTT TATGTCGGAA TATTGGGAGA CATGCTTTCC ATTCGCTGGA AAGAAAGGGA ATTTACCGAG ACGTAAGTTT CTTGGGCAAA TTATTCAGCG TTTTGGCCTT GCTCTAGATA AGCTGGACTT TGCCAACTTT ACTACCTCAG AAAGAGAGAG TTTACGTACT GCCAATGACT TTTGGCATGG TGTTGCGAAA GAACAGGAAC TTGCTTCTGA GAATGTTGAA ACCATCATCG AGGTTATTAA CAGAAAGCTC CAAAACTCAG AAAAAAAGCA TGTAGAAACG CAAAGTAAAT CTCAACCTCA GGCTGAATAT AAAACTGTAG AGGTCGTGCC TTCTAAACCA GCGATTGAAG TGGATTACAG CTCTGCAAAA AGCACTAAGC AGACCATGCT GAAAGTCGCC GAATTCCTCT CGGAAAACGA AAATAGTCTG GAATTATCCA TTCGGATTAG GCGCTATGCG GTTTGGTCGC CGATTACCAC ATTGCCAGAT AATGTGAACA AGCAAACTTT GATTAGTGCT TTGCCGCAAG AGCGAGTGAA AGACTATTGG AGCTTGCTTG ATAGTGCAGA CCTAGCCTTA TGGAAGCGAG TTGAAGCCAC GCTGACCGTT GCACCTTATT GGTTTGATGG GCAGTTTCTA AGCTATCAAA TTGCTGAAAA ATTAGGGTAC ACGGAATCTG CTCAAGCCGT TCTAACGGAA ACTCAGCGAT TTCTTCAGCG TTTTCCCTCC CTGTATGATT TCACCTTTAA AGATGGTGAA GTTTTCGTTT CTGATGCTTG TCGGAATTGG CTGGAACAAG CAGATGAAAC GAATGTAGAA GAAACTAACC TAGCTGGTGA CAGCTGGGCG GAGAAAAAGA AAATGGCCGT TGATTTAGTG GAAAAAGAAG GCATTGGTGC CGCTTTATCC ATGATCAATG AAGGGATTAG TAAAGCGGTG GAGCCAAGGG ATAATTATTA TTGGCGCCTT ATTTCTACGG AATTATTGGA AGAAAATAAA CTAAATGATT TAGCCCAGCA GCAGTTTCAG CAACTACATA CACAAGTTCA GTCAATGTCG GTTTCGGAAT GGGAACCCTC TTTGCTCAAG CGAGTAAAGA AGCACATTAC AGTCAAATAA
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Protein sequence | MDINLIRTSI REPISTDQPV GESAIHDPLY EFVDDQMMKV GSLSHGSVQW KKAEESLIEL LSKKTKDLKL LTYFFQCLHN KNTPDSLTLS IFVLADFMSE YWETCFPFAG KKGNLPRRKF LGQIIQRFGL ALDKLDFANF TTSERESLRT ANDFWHGVAK EQELASENVE TIIEVINRKL QNSEKKHVET QSKSQPQAEY KTVEVVPSKP AIEVDYSSAK STKQTMLKVA EFLSENENSL ELSIRIRRYA VWSPITTLPD NVNKQTLISA LPQERVKDYW SLLDSADLAL WKRVEATLTV APYWFDGQFL SYQIAEKLGY TESAQAVLTE TQRFLQRFPS LYDFTFKDGE VFVSDACRNW LEQADETNVE ETNLAGDSWA EKKKMAVDLV EKEGIGAALS MINEGISKAV EPRDNYYWRL ISTELLEENK LNDLAQQQFQ QLHTQVQSMS VSEWEPSLLK RVKKHITVK
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