| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0876 |
|---|
| Symbol | |
|---|
| ID | 5365837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 967255 |
|---|
| End bp | 967935 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803210 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001339743 |
|---|
| Protein GI | 152994908 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.140831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCC GAATGGGTCG CCCTAAACAG TCTGATAAAA ATCAAGATTC TGCTCGCAGT
AGTTTAATTG CTGCCGCCAA GCGTTGTTTC TCTGAACAGG GTTTTGATAA GGTATCAACA
CGAAAAATTG CCCTATCAGC GGGAGTGGAT GCGGCGATGA TTCGGTATTA CTTTGGCTCC
AAAACGGGTT TATTCGAAGC AACAATACAA GAAACCTTAG CTCCAGTTAT GGAACAATTC
CAAGCCGATG TTGACCCCAA CACTCCACCC AATCCATTGT TACTGATGCA AACCTACTAC
CGCATGATTG CCAATAACCC CATGCTGCCA AAATTGATTT TGCAGGTGAT CAACCAAAAA
GATAATCCCG AAGCATTTGG TATTTTGACA GGCATTATCG ACAACATCTT GAAACGATCA
GAAAAATGGA TCGAGGCATT TGAACAGCAA AAAAAAATTA ACCCCAATCT AAACCCGGCA
TGGATTCGCC TTAGCTTTGT CAGCTTAATG ATTTTTCCGG TATTAGCACC AAAATATCTT
CAACAACAAC TTGGAGTCGA ACTCAAAGAA GACTGGTTAT TAAATCTAGC GGATCATAAC
CAAACATTGT TAGAACAAGG ACTTTTCACC TCTCCATCAC CACAACCATC ATCCAACGAC
ACCAAAGGTG AGCAAGAATG A
|
|---|
| Protein sequence | MTTRMGRPKQ SDKNQDSARS SLIAAAKRCF SEQGFDKVST RKIALSAGVD AAMIRYYFGS
KTGLFEATIQ ETLAPVMEQF QADVDPNTPP NPLLLMQTYY RMIANNPMLP KLILQVINQK
DNPEAFGILT GIIDNILKRS EKWIEAFEQQ KKINPNLNPA WIRLSFVSLM IFPVLAPKYL
QQQLGVELKE DWLLNLADHN QTLLEQGLFT SPSPQPSSND TKGEQE
|
|---|
| |