Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5582 |
Symbol | |
ID | 4114450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008147 |
Strand | - |
Start bp | 161878 |
End bp | 162792 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638034737 |
Product | integrase catalytic subunit |
Protein accession | YP_642738 |
Protein GI | 108802542 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.0423164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCACCG AGCACGCCGT GCCGATCGCC CCGCGGACAT TTCATGCCTG GGCGGTGCGG GCGCCCTCGA AACGGGCCCT GTGGGACGCC ACGATCACCG AGATCCTAGC CGGCTACTAC GAGCCTGATG AGCACGGACG CCGCAGGCCC GAGTCGCTGT ACGGGTCGCT GAAGATGTGG GCCCATCTGC AGCGTGAGGG CATCCCGGTG GCCAAGTCCA CCGTGGAACG CCTGATGCGC AAGAACGGCT GGCAAGGCGT GCGCCGCCAG AAGAGGGTCC GCACCACGAT CCCCGACCCG GAGGCGGTGC GACCGCCGGA CCTGGTGGAC CGCCAATTCG GGGTGGCCGC ACCCAACGTG CTGCTCGTGG CCGACTTCAC CTACGTCAAG CTCGTCACCG GCGTGTTCGT CTACGTCGCG TTCGTCATCG ACGCCTACGC CGGGTCGATC GTGGGCTGGG AAGCCTCGGC GTCCAAGCAC ACCCGCTTCG TCGAATCCGC GCTGCGTCAG GCCGCTGCAC TGCGTGCCCG CCAAGGCCAT CCCGTCGACG GCGCAATCCA TCACAGCGAC GCCGGCTCGC AGTACACGAG TGTGAGATTT GGTGAGACAC TGAGCCTTTC GGGAATTCGC CCGTCCGTGG GCAGTGTTGG GGATGCCTTC GACAACGCGC TGGCTGAGAC GACCATCGGC CTGTACAAGA ACGAATGTGT CCGGGCGGAT TCCCCGTTTC GCCGCGGCCC ACTGAACACC GTGGGCGACG TCGAATACAT CACCGCCGAC TACGTCGCCT GGTACAACCA GCAGCGCCTG ATGCACCGAC TCGGACGCAT TCCGCCGGCC GAAGCCGAAG CCCGCTACTA TTCCCAACTC GTGACCGGTA GACCGGCCGG ATCACAGAAA CCTGAGGGTG CATGA
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Protein sequence | MLTEHAVPIA PRTFHAWAVR APSKRALWDA TITEILAGYY EPDEHGRRRP ESLYGSLKMW AHLQREGIPV AKSTVERLMR KNGWQGVRRQ KRVRTTIPDP EAVRPPDLVD RQFGVAAPNV LLVADFTYVK LVTGVFVYVA FVIDAYAGSI VGWEASASKH TRFVESALRQ AAALRARQGH PVDGAIHHSD AGSQYTSVRF GETLSLSGIR PSVGSVGDAF DNALAETTIG LYKNECVRAD SPFRRGPLNT VGDVEYITAD YVAWYNQQRL MHRLGRIPPA EAEARYYSQL VTGRPAGSQK PEGA
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