Gene Mmcs_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5392 
Symbol 
ID4114218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp5681964 
End bp5682578 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID638034547 
Producthypothetical protein 
Protein accessionYP_642548 
Protein GI108802351 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.891404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACG TGGCGCAGTC AGAGGATCCG GAGGACTTCA TCGCTCCCGC GGCACAGCGG 
GTGCGCGCGG GGACGCTGTT GCTCGCCAAC ACCGATCTGC TGGAGCCGAC CTTCCGGCGC 
AGCGTCATCT ACATCGTCGA ACACAACGAC GGCGGAACCC TCGGGGTGGT GCTGAACCGG 
CCGAGCGAGA CGGCGGTCTA CAACGTGCTG CCGCAGTGGG CGAAGCTGGC CGCCAAACCC 
AAGACGATGT TCATCGGCGG GCCGGTGAAG CGCGATGCCG CGCTGTGCCT GGCCACCCTG 
CGGGCGGGTG TGGAGGCCGC CGGTGTGCCG GGGTTGCGGC ACGTGCAGGG ACGCATGGTG 
ATGGTCGATC TCGACGCGGA CCCCGAACCG CTGGCCCCGG CGCTCGAGGG CGTGCGGATC 
TTCGCCGGCT ACTCCGGCTG GACCATCGGC CAGCTCGAGG GTGAGATCGA GCGCGACGAC 
TGGATCGTGT TGTCGGCGTT GCCTTCCGAC GTGCTCATCG AGCCGCGGGT GGATCTGTGG 
GCGCGGGTGC TGCGTCGTCA GCCGCTACCG TTGTCGCTGT TGGCGACCCA TCCGATCGAC 
GTCAGCCGCA ACTAG
 
Protein sequence
MVNVAQSEDP EDFIAPAAQR VRAGTLLLAN TDLLEPTFRR SVIYIVEHND GGTLGVVLNR 
PSETAVYNVL PQWAKLAAKP KTMFIGGPVK RDAALCLATL RAGVEAAGVP GLRHVQGRMV 
MVDLDADPEP LAPALEGVRI FAGYSGWTIG QLEGEIERDD WIVLSALPSD VLIEPRVDLW 
ARVLRRQPLP LSLLATHPID VSRN