Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2023 |
Symbol | |
ID | 4110857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2172537 |
End bp | 2173259 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638031145 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_639188 |
Protein GI | 108798991 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGGG TCGCGCTGGT CACCGGCGCG GCGCGCGGAC AGGGCGCCGC GATCGTGGCG CGCCTGCACG CCGACGGGTA CCGCGTGACG GCCTGCGATG TGCTGATCGA CGAACTGCGC ACCGCCGTCG CCGATCTCGG TGACGACGTG CTGGCGATCG AGTTGGACGT CACCTCGGCG CAGCAGTGGG CAGCCGCCGT CGCGGACACC GTCGAGCGGT TCGGTGCGCT CACCGCGCTG GTCAACAACG CCGGTGTGCT GCACCGCGCG CCGATCGCCG ACGAGACCCC GGCCGCCTTC GAGAACAGCT GGCGGGTGAA CTGTCTGGGC CCGTTCCTGG GCATCCAGGC CGTGCTGGAG CACCTGAAGG CCGCCGACGG CGCGGCGATC GTCAACACGT GCAGCACAGG CGCGATACGG CCGTTCCCGC ACCACGCCGC CTACGGGTCG GCCAAATGGG CGCTGCGCGG GCTGACCCAG GTCACCGCCG CCGAGCTCGC GGTCGACGGC ATCCGGGTCA ACGCCGTGTT CCCCGGACCC GTCGAGACAC CGATGCTCGA CCCGGACACC CAGACCCGCC TGGCGGCCAG GGCGGTACTC GGCCGGATCG GCAAACCGGT CGAGATCGCC GACGCCGTCG CGTTCCTGCT GTCGGACCAG GCGTCGTTCA TCACCGGATC CGAACTGGTC GTCGACGGCG GCCAAACCCT GCAGATCGGA TGA
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Protein sequence | MNRVALVTGA ARGQGAAIVA RLHADGYRVT ACDVLIDELR TAVADLGDDV LAIELDVTSA QQWAAAVADT VERFGALTAL VNNAGVLHRA PIADETPAAF ENSWRVNCLG PFLGIQAVLE HLKAADGAAI VNTCSTGAIR PFPHHAAYGS AKWALRGLTQ VTAAELAVDG IRVNAVFPGP VETPMLDPDT QTRLAARAVL GRIGKPVEIA DAVAFLLSDQ ASFITGSELV VDGGQTLQIG
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