| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1534 |
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| Symbol | |
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| ID | 4110370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 1670396 |
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| End bp | 1671223 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638030655 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_638701 |
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| Protein GI | 108798504 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTC TATCGAACAG GGTCGCCCTC GTCACGGGTG CGACCGCCGT GGAACCCGGC
GGCCTCAACA TCGGCGGTGC CGCAGCCACC GAGGTGGTGG CCGAAGGCGC CCGCGTGGTG
CTCGCCGACA TCAACATCGA GGGCGCTTCG GCTCTCGCCG AGCAACTCAA CCAGAAGTAC
GGCCCGGACG TCGCGATCGC GGTCCAGACC GACCTCCGCG ACGAGGATGC GATTCAACGG
CTCGTGGCCA CCACGGTCTC CACCTTCGGC AAAATCGATG TGCTGTTCAA CATCGCCGGC
GTCTTCCCCG CCGGTGACGG TGACGTCGCC ACCATGCCGA TCGAGGTCTG GGACGACGTG
ATGGCGGTCA ACGTGCGCAG TGCCATGCTC ACCACCAAAC ACGCTCTGCC GCATCTTCGC
GTCGAGGGCG GGTCGATCGT CAACACCGCG TCCACCCATG CGTTCGCCGG CGACACCAGC
CTCACCGGCT ACGGTGCGAC CAAGGCGGCG TTGCTGGCCC TGACCAAGTA CACCGCCACG
CAGTACGGGC GGGAACGGGT GCGGTGCAAC GCCATCTGCC CGGGCACCAC CACGACACCA
CCGGCCCAGC AGTTGCCGGA GGCCGTCAAG GACATCTACC GCCGCCATAC GCCCGCACCG
GACCTCAACG GCCCCGCCGA TCTGGCCAAG GTGTATGCCT TCCTGGCATC CGATGACTCT
CGCGGGATCA ACGGCGAGAC CATCCGGGTC GACGGCGGGC TGCTGGCCCA CCAGCCCTTC
GTCCCGGACA TGGACTCACT GGGCGCCGCG ACGGCCACGT CCCAGTAG
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| Protein sequence | MPRLSNRVAL VTGATAVEPG GLNIGGAAAT EVVAEGARVV LADINIEGAS ALAEQLNQKY
GPDVAIAVQT DLRDEDAIQR LVATTVSTFG KIDVLFNIAG VFPAGDGDVA TMPIEVWDDV
MAVNVRSAML TTKHALPHLR VEGGSIVNTA STHAFAGDTS LTGYGATKAA LLALTKYTAT
QYGRERVRCN AICPGTTTTP PAQQLPEAVK DIYRRHTPAP DLNGPADLAK VYAFLASDDS
RGINGETIRV DGGLLAHQPF VPDMDSLGAA TATSQ
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