Gene Mmc1_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3713 
Symbol 
ID4481050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4667255 
End bp4667950 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID639724469 
Producthypothetical protein 
Protein accessionYP_867604 
Protein GI117926987 
COG category[S] Function unknown 
COG ID[COG3439] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGC GCGGATGGAT GCAGGGGTTG TTGGTGGTAT TGGGTTTGGT GTCAGCGGTG 
GGGGTGCAGG CGCAGGGGCA GATGGAGATG CCTAATATGC AGATGCCCAA TATGCAGATG
CCTAATATGC AGATGCCCAA TATGCAGATG CCAGGCATGC CCACGATGCC CATGGCGTCA
AACCCCAGGG TGCAGGTGCC CATGGGCTAT GGTTCACCGG CGGGGGATAT CTCTCCGGCG
CTTATGCAAT TTGACAAAAT TCCAGGTGTT ATCAATCGGG GTCCGGTCTT GCAAATTCCC
ATGCCCCAGG GTTACAGCAT GGAGGATGTG GTGTTTGATC TGGAGTCGGG TTTGGCCGAG
CACAATTTAA AGGTTGTGGC CAAACAGCAT TTGGGCAAGG CGATTGCGGA GCGCAGTGGC
GAGCCCTTTC CGGCCTATGA CATTTACCAT ATTTGCAATC TGACGGTGGG TGAGAAGATT
ATCCGGGCAG AACCAGCATT TGGGGCCTTT TTGCCGTGCA AGGTGGTATT GTACCAAGAT
CCCCAGAGTA AGCGTATTTG GGCAGTGACT TACAAACCCT CGTTTGCCAT GGTCTATTTT
CCGTTTATGC CTGAAGAGAC CAAAGCGGCG GCCAATCAAA TTGGCGATCA TCTGTTTAAT
ATTTTGTTCG GCATTGCCTC TTCCAACGAT CAATAG
 
Protein sequence
MLMRGWMQGL LVVLGLVSAV GVQAQGQMEM PNMQMPNMQM PNMQMPNMQM PGMPTMPMAS 
NPRVQVPMGY GSPAGDISPA LMQFDKIPGV INRGPVLQIP MPQGYSMEDV VFDLESGLAE
HNLKVVAKQH LGKAIAERSG EPFPAYDIYH ICNLTVGEKI IRAEPAFGAF LPCKVVLYQD
PQSKRIWAVT YKPSFAMVYF PFMPEETKAA ANQIGDHLFN ILFGIASSND Q