Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3630 |
Symbol | |
ID | 4480530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4560905 |
End bp | 4562179 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724379 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_867521 |
Protein GI | 117926904 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.414875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG CCAATCTGGT GCTCTTCAAA AACATCCATA TTCAGGGGCA AAACACCCTT GCAGTCGCTC AACAGCAGGG CGCCTACAAG CGGATGGAAA AGGCCTTGGG GATGTCCGGT GAAGAGATTA TCCAAGAGGT TAAGAGTGCT GGCCTGCGTG GCCGCGGTGG GGCCGGATTT CCTGCGGGCC TAAAGTGGTC CTTTATTCCC AAGGATGATC CCAGGCCCAA ATATCTGGTT TGCAACGCCG ATGAGGGCGA GCCCGGAACC TGTAAAGATC GTGATCTCAT GCGTTTTGAT CCCCATCTTC TGATTGAGGG TATGATCATT GCGGGTTATG CGGTCAACTC CAAGCAGGGT TACATCTATA TTCGCGGTGA GTTTTATCGC GAGGCAGAGG TTTTAGAAGC GGCGGTGGCC GAGGCGTATG CGGCCAATCT GCTGGGCAAA AACATCCTGG GTAAGGGAGT GGATTTTGAT CTGGCGGTGC ATCGGGGTGC TGGTGCCTAT GTGTGCGGTG AAGAGAGCGC CCTGCTGAAT TCCCTGGAAG GGGAGAAGGG TCAACCCCGT CTCAAGCCAC CCTTCCCAGC CAACGTGGGG CTGTATGGTT GCCCCACGGT GATCAATAAT GTTGAGACCC TCTGCGCGGT ACCGGCCATC CTGGAAAAGG GTGGCGCGTG GTACAGCAAG TTGGGGGTAG AGAAGTCGTC GGGTACCAAG CTGTTTAGTG TCTCGGGTCA TGTTAACAAA CCGGGCAACT ATGAGGTTGA GTTGGGTATT CCGCTAAAGA GCTTGATCAA CGACTATGCT GGTGGTGTGC GGGGTGGTTG GGAGAATCTA AAGGGGGTTA TCCCCGGTGG TTCATCGACG CCCGTGCTTA TTCCCGAACA GTGTGAAACC ATCCTCATGA GCTATGAGGC GCTGGCTGGA GCGGGCTCCA TGCTGGGTGC GGGTTCGGTG ATTGTGATGG ATAAATCCAC CTGCATCGTC AAAGCCATTG CCCGGTTGAG CAAGTTTTAT CGCCACGAGT CTTGTGGTCA ATGCACCCCC TGCCGGGAGG GTACCGGTTG GTTGGCGCAG ATTATGGACC GTATCGAAAC GGGTCAGGGT CGTGAGGGTG ATATTGATCT GCTTCTCAGT GTGTGCAGTA ACATTCAGGG CAAAACCATT TGCGCCCTGG GTGATGCAGC GGCGATGCCT GTGGTTGGGG CGATCCGCCA TTTCCGGGAC GAATTTGAGT ACCATGTTAA ACATGGTCGC TGCATGGTGG ATTGA
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Protein sequence | MSEANLVLFK NIHIQGQNTL AVAQQQGAYK RMEKALGMSG EEIIQEVKSA GLRGRGGAGF PAGLKWSFIP KDDPRPKYLV CNADEGEPGT CKDRDLMRFD PHLLIEGMII AGYAVNSKQG YIYIRGEFYR EAEVLEAAVA EAYAANLLGK NILGKGVDFD LAVHRGAGAY VCGEESALLN SLEGEKGQPR LKPPFPANVG LYGCPTVINN VETLCAVPAI LEKGGAWYSK LGVEKSSGTK LFSVSGHVNK PGNYEVELGI PLKSLINDYA GGVRGGWENL KGVIPGGSST PVLIPEQCET ILMSYEALAG AGSMLGAGSV IVMDKSTCIV KAIARLSKFY RHESCGQCTP CREGTGWLAQ IMDRIETGQG REGDIDLLLS VCSNIQGKTI CALGDAAAMP VVGAIRHFRD EFEYHVKHGR CMVD
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