Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3605 |
Symbol | |
ID | 4483435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4526656 |
End bp | 4530390 |
Gene Length | 3735 bp |
Protein Length | 1244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724354 |
Product | Zinc finger-domain-containing protein |
Protein accession | YP_867496 |
Protein GI | 117926879 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.188848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTAATG TGGCGGGTAT CTCGCATAGG ATATTGAATT GGTTGAGATA TTGCTGCTTC GTAGGGCTGT TTCAGCGCCA GTTGAGGACG GAACCGGAGA ACATCGTGAT CGTAACCTGT GAAAATTGTG ATGCACGTTT TGACGTTGAT CCTCAGTTAT TGGGGTCCAA AGGGCGCAAA TTAAAGTGCT CTCAGTGCCA TCATATTTTT TTCCAAGCAC CTCCTGAGCC AAAGTCAGCG CAGCCCCCTG CGTCAGAGCA GCCTGGGCTT GAGGATGAAA GCACAGCGCA AGATAACGAC ACAGAGTCCC GTGACTATGC TGAGTTTGCC TTTGAGGAGT CACCCTTAGA AGAGGTGGAT CTGGATGAGA TCGAAAAACT GACGGCTCAA GCCACGCTGG ACATGGCGCT GGAAGCCACC CGAGATAAGC GTCAGGAGCC CAGTTTTGAC GAGGATACGC AGGTTGATGA GGATGCGGTC ATTGAGCCCA GCTTGGAGGA GGTGGATGTT GACCAGATGA TCCAAGCCGC GACCGCGTTG CCCACGGAGC CTGAAGCAGC TTCCGAAGCT GAGGAAGAGC TTGAGGCTGA GGAAGAGCTT GAGGCTGAGG AAGAGCCCGA AGCCGAGGAA GAGCCCGAAG CCGAGGAAGA GCCCGAAGCC GAGGAAGAGC CTGAGGCTGA GGAAGAGCTT GAGGCTGAGG AAGAGCCCGA AGCGGAGGAA GAGCCCGAAG CCGAGGAAGA GTCCGAAGCG GAGGAAGAGT CCGAAGCGGA GGAAGAGCCC GAAGCGGAGG AAGAGTCCGA AGTTGAGGAA GCGCCCGAAG TTGAGGAAGA ACTTGAGCTA GAAGAAGAAG CTGAGGAAGA GCCCGAAGCC GAGGAAGAAG CTGCGCCCGA AGCCGAGGAA GAAGCTGCGC CCGAAGTTGA GGAAGAGCCT GAAGTCGAGG AAGAACTTGA GCTAGAAGAA GAAGCCGAGG AAGAGTCTGA AGCCGAGGAA GAGTCTGAAG CCGAGGAAGA AGCTGCGCCC GAAGCCGAGG AAGAAGCTGC GCCCGAAGCC GAGGAAGAAG CTGCGCCCGA AGCCGAGGAA GAAGCTGCGC CCGAAGCCGA GGAAGAAGCT GCGCCCGAAG TTGAGGAAGA GCCTGAAGTC GAGGAAGAAC TTGAGCTAGA AGAAGAAGCT GAGGAAGCGC CTGAAGCCGA GGAAGCGCCC GAAATCGAGG AAGAGCTTGA GGCTGAGGAA GAGCTTGAGG CTGAGGAAGA GCTTGAGGCT GAGGAAGAGC TTGAGGCTGA GGAAGAGCTT GAGGCTGAGG AAGAGCTTGA GGCTGAGGAA GAGCTTGAGG CTGAGGAAGA GCTTGAGGCT GAGGAAGAGC TTGAGGCTGA GGAAGAGCTT GAGGCTGAGG AAGAGCTTGA GGCTGAGGAA GAGCTTGAGG CTGAGGAAGA GCTTGAGGCT GAGGAAGAGC TTGAGGCTGA GGAAGAGCTT GAGGCTGAGG AAGAGCCCGA AGCTGAGGAA GCGCCCGAAA TCGAGGAAGA GCTTGAGGCT GAGGAAGAAT CAGAAGCTGA GGAAGTGCCC GAAATCGAGG AAGAGCTTGA GGCTGAGGAA GAGCCCGAAG TTGAGGAAGA GCCCGAAGTT GAGGAAGAGC CTGAAGTCGA GGAAGAGCCT GAAGTCGAGG AAGAGCCTGA AGTCGAGGAA GAGCCTGAAG TCGAGGAAGA GCCTGAAGTC GAGGAAGAGC CTGAAGTCGA GGAAGAGCCT GAAGTCGAGG AAGAACTTGA GCTAGAAGAA GAAGCTGAGG AAGCGCCCGA AGTTGAGGAA GAACTTGAGC TAGAAGAAGA AGCCGAGGAA GAAGCTGCGC CCGAAGTTGA GGAAGAGCCT GAAGCTGAGG AAGAGTCCGA AGCCGAGGAA GAAGCTGCGC CCGAAGTTGA GGAAGAACTT GAGCTAGAAG AAGAAGCTGA GGAAGAGCCC GAAGCCGAGG AAGAGCTTGA GGCCGAAGAA GAGCCCGAAG CTGAGGAAGA GCCCGAAGCC GAAGAAGAGC CCGAAGCCGA AGAAGAGCCC GAAGCTGAGG AAGAGCCCGA AGCTGAGGAA GAGCCCGAAG CTGAGGAAGA GCCCGAAGCC GAAGAAGAGC CCGAAGCCGA AGAAGAGCCC GAAGCCGAAG ATGCCTTTGC TCTTGATGTG GATGAGCAGG TTCCCGCCGC TGACTTTGCG GATGATGGTG ATTTCTTGAG CGAATCGGCT CTACAAGAGG AGCAGGATAA GCTCTTGGAT GTAGACGATT TTAATGCCGC CACCATGGTA GAGCCTGCGT CCCTGGTAGA AGAAGATGAA TTGGATCTGG CCGAGGTGAT GGAAAATGCC GAACGCACAG CGGATGAGGC GTTTAATCCT TCGGCCATGG CGGAGCCGGA TCTGTTGGAG TCTGAATTAC AGTTAGAAGA TGTGGAAGCC GAGGTGGTTG AAGAGGGGGG TGCTGAGCTG ACTCTGGAGG GTGAAGAGCA GGCCGCTTTT GCAGACCTGT TAACCGAAGA GGACGACCTC TCCGCGCTGG CCGATGATGC GTTGGATCTG GATGATGACG ATGATGTGAC GGTGTTGGCT GATCCCCCCG CCATGGATCT GGAGGGGCTG GTCGATGCGG TGGAGAGCGA TCACGAAGTC GCCTTTGAAG ATGAATCTGT CGAGGCTTTT GCGCCCCTGG GCGATGACCT GCCCAATGAT CTGGATGACT TGACGGAACT GGTGAATGAG CCCGGTGGGG AGCTGATGCT GGATGATGAT CTTGCCGCCC TAGCGCCATC CCCGGTAATG CAGGAGCGTT TGGTTCCGGC AGATGGTATG GATGAGCTCT CTGCGCTGGC CTCCGATGAT CAGGATGAGA TCAACCTAGA TCTGCCAGAA TCCAATGATC TAAGCCTAGG GGATCTGGGT GAGGCCGAAT CGTGGTCGCC GGATGATGAG CTGCTCGAAC CAGAAGATGA GACCATTTTG GCGGTGCCCG ACTCCGATGA GACCATTGAG GAGCTGGATT TTCCTGAGCC GGATATTCCG CAGCCCAAGG AGGAGATCAT TGAGCTGGAT TATGGCCAAC AAGAAGAGGA GCCCTTTGAT CTAAGCAGCA GCCCCGATGA TGAGGATGAG GATCTGGAGT GGGCCAACAC GGCGACTCCA GCCAAGGAAA AGGGGGGGCT TGGAGGGTTG CTAGGTTGGG GGGTGGCGGC CATGATGCTG TTGGCGGTCA TCGGTGCTTG GTTTGGCAAA GATTATCTCA GCCGTGGTGG GGCCACCAAC CGTGTGGATG ACTTCACCCT AGATGGTGTC GAGGTAAAAT GGCGGGAATC TGACCATGGT GTGCTGCTGA TTGTTGAAGG CAGCATGACC AACCAGATGA ATCGCCGTTC AGCCCGTCGC CCTATGATGG CCCGCGTAAC CTTGTTGGAT GAAAACAACC GCAATCTCAA CTCGGTAAGC GTGATCCCAG AGCGGATTAT TCCCGAACGG GCGATGAATT TAAACCCAAA CAATATGGCG CGGATTATTA CCAAACAGGG GGACATTGAA ACACGCTTCA ATAAGATGAA CCCCAAGCAA CCGGTCAAGT TCCAAGCGAT CTTTATGGAT CCACCCATGG AGGCGGTGCG TTACCGGATT GATTTTGATG CCACCCCCGA GGCCGAGTGG GAAAAACAGA AAAAGGCTCG ATCTCAAGCC ATTAAAAATC GTGAGGGTAC AACCACCTTT ATGGGCAATT TTTAA
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Protein sequence | MGNVAGISHR ILNWLRYCCF VGLFQRQLRT EPENIVIVTC ENCDARFDVD PQLLGSKGRK LKCSQCHHIF FQAPPEPKSA QPPASEQPGL EDESTAQDND TESRDYAEFA FEESPLEEVD LDEIEKLTAQ ATLDMALEAT RDKRQEPSFD EDTQVDEDAV IEPSLEEVDV DQMIQAATAL PTEPEAASEA EEELEAEEEL EAEEEPEAEE EPEAEEEPEA EEEPEAEEEL EAEEEPEAEE EPEAEEESEA EEESEAEEEP EAEEESEVEE APEVEEELEL EEEAEEEPEA EEEAAPEAEE EAAPEVEEEP EVEEELELEE EAEEESEAEE ESEAEEEAAP EAEEEAAPEA EEEAAPEAEE EAAPEAEEEA APEVEEEPEV EEELELEEEA EEAPEAEEAP EIEEELEAEE ELEAEEELEA EEELEAEEEL EAEEELEAEE ELEAEEELEA EEELEAEEEL EAEEELEAEE ELEAEEELEA EEELEAEEEL EAEEEPEAEE APEIEEELEA EEESEAEEVP EIEEELEAEE EPEVEEEPEV EEEPEVEEEP EVEEEPEVEE EPEVEEEPEV EEEPEVEEEP EVEEELELEE EAEEAPEVEE ELELEEEAEE EAAPEVEEEP EAEEESEAEE EAAPEVEEEL ELEEEAEEEP EAEEELEAEE EPEAEEEPEA EEEPEAEEEP EAEEEPEAEE EPEAEEEPEA EEEPEAEEEP EAEDAFALDV DEQVPAADFA DDGDFLSESA LQEEQDKLLD VDDFNAATMV EPASLVEEDE LDLAEVMENA ERTADEAFNP SAMAEPDLLE SELQLEDVEA EVVEEGGAEL TLEGEEQAAF ADLLTEEDDL SALADDALDL DDDDDVTVLA DPPAMDLEGL VDAVESDHEV AFEDESVEAF APLGDDLPND LDDLTELVNE PGGELMLDDD LAALAPSPVM QERLVPADGM DELSALASDD QDEINLDLPE SNDLSLGDLG EAESWSPDDE LLEPEDETIL AVPDSDETIE ELDFPEPDIP QPKEEIIELD YGQQEEEPFD LSSSPDDEDE DLEWANTATP AKEKGGLGGL LGWGVAAMML LAVIGAWFGK DYLSRGGATN RVDDFTLDGV EVKWRESDHG VLLIVEGSMT NQMNRRSARR PMMARVTLLD ENNRNLNSVS VIPERIIPER AMNLNPNNMA RIITKQGDIE TRFNKMNPKQ PVKFQAIFMD PPMEAVRYRI DFDATPEAEW EKQKKARSQA IKNREGTTTF MGNF
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