Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3601 |
Symbol | |
ID | 4483431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4521219 |
End bp | 4523099 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639724350 |
Product | alginate biosynthesis sensor protein KinB |
Protein accession | YP_867492 |
Protein GI | 117926875 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGGAA TCCGGTCAAA AATTCTGGCC GTGTGGGTGG TCATGCTGGC CACCGTGGCG GGGTCTGGGC TGGTGATCCT GGCCCATCTC ACCGAACTCG GCGAGGCGGT GGATGTCATT CTGCGGGAGA ACTACCGCAG TGTCATCGCC AGCCAAGAGA TGAAGGAGGC GCTGGAACGT ATGGACAGCG GCGTGCTGTT CCATTTTGCC GGACGTGGGC ATGAAGGTGC CGCTATCCTC GACGCAGGCA TTGCCGACTT CCGCAAGGCC CTGGATGTGG AGATGGGCAA CATCACCCTG CCAGGTGAAC AGGAGACAGC CGAACGGCTC TCCCGAGCGT TCGACGCGTT TATTGAAACC ATTCCCACCG TGGTTGATCC CGCTCGGGAG GAGGCGTCCC GCCGGACCGA CTATTTTGCC CGCCTGTTGC CGCGTTTTCA GGAGATCAAA TCCCTGGCCA ATGCGCTGTT GGAGATGAAC CAGAGTAACA TGTCCGAGGC CAATGATCGT GCCCGCGCCA AGGCAGCTCT GACCGCTCGG GTGATCCTGT GGTCACTGCT CGCTTGCGGC TTGACAACCA TACTCTTTGG TCATCTGATC CAGCTCTGGA TTCTGCACCC AATACGCCAT TTGACCCGTT CGGTGGAGGA GATTCGGGGC GGCAACTTCG ATCTGGTGCT CTCCGTTGGC GGGCGCGATG AGTTTGCCCG TTTGGCCAGC GGGTTTAATG CCATGGCTGC CACGATCCGC GAACTGCGCC GCCGCGACCA ACGGGACGTG GCACGCAACC GGCAAGCTAT GGGCGAGGTG TTCCAGGCAC TGCCGGTGAC GGTGGCAATC GTGGATGCAG AGGGCCGCAT AGAAGAGGCC TCCACTTTAG CAGAGCATTG GTTCGGATTG AAATCTGGAT TGCCACTGCG TGAATCTGGC TTGGAGATGA TCCAGGAATT GGCTGAAAAA GCGCTGTTGG AGGCCACGCC CCAAGAACCC CCTAATCCAG ACGACCTGAT CCAGCGATTC GTGGATGGCG AGGAACGGTT TTTTCGTCCA CTGGCCACTC CCATCCACTC CCTGACAGAG AACCAGACCG GCACCGCCAC CGAACCTGTT GGTGTGGCCA TCATCCTCAA GGACTTCACC CAAGTCAGAG AACAGCGGGA GCTGAAGCGT AGTGTGGTAG GCACGGTCTC CCATCAGTTA AAGACGCCGC TAACGGCCTT GCGTATGTCC TTGCATCTGC TGCTACAGGA GGCGTCGGAA CCACTGACGG CGCGTCAGGA GGATCTACTG CAAACAGCCC GGGACGAAAG TGAACGCATG GTGAAGATCC TCGATGACCT GCTGGACATT CACCGAGCCG AGGCCGGATT CAGAAGGCTC AACCGAGAGG CGGTCCGTCC CCAGTGGTTG GCGGAAGAGG CCACGCGCAT CCATCAAGAG GACGCCAACC GGCGCGGAAT CGCGCTGAAT GTTCGGGTTC CTGCCGATCT TCCAGAGGTG TTGGCGGATT CCCCGCGCCT GGCGCATGTC TTCGACAACC TATTGGCCAA CGCGCTGCGC CATACCCCAC CCAGAGGCGC GGTGACGGTC TCCGCCATTT CCGAAGTAGG CATGGTCCGG TTCTTGGTGA CAGACAGCGG TTGCGGCGTC GCCGTGGAGG ATCGGACGCA GGTCTTTGAA CCCTTCTGGC GTGGCACGGG CCAGTGCCCC GACAGCGGAG TAGGCCTAGG CCTGACCATC GTGCGGGAGA TTGTCCGTGC TCATAATGGC GAGGTCGGCG TAGCAGGCGC TCCAGGCGGC GGAGCCGTCT TCACCTTTAC CCTGCCCGCA GTGGAGCGTC CGCCAGCACG GCCAGACACC ACGCTAGGAG CCTGCCCATG A
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Protein sequence | MYGIRSKILA VWVVMLATVA GSGLVILAHL TELGEAVDVI LRENYRSVIA SQEMKEALER MDSGVLFHFA GRGHEGAAIL DAGIADFRKA LDVEMGNITL PGEQETAERL SRAFDAFIET IPTVVDPARE EASRRTDYFA RLLPRFQEIK SLANALLEMN QSNMSEANDR ARAKAALTAR VILWSLLACG LTTILFGHLI QLWILHPIRH LTRSVEEIRG GNFDLVLSVG GRDEFARLAS GFNAMAATIR ELRRRDQRDV ARNRQAMGEV FQALPVTVAI VDAEGRIEEA STLAEHWFGL KSGLPLRESG LEMIQELAEK ALLEATPQEP PNPDDLIQRF VDGEERFFRP LATPIHSLTE NQTGTATEPV GVAIILKDFT QVREQRELKR SVVGTVSHQL KTPLTALRMS LHLLLQEASE PLTARQEDLL QTARDESERM VKILDDLLDI HRAEAGFRRL NREAVRPQWL AEEATRIHQE DANRRGIALN VRVPADLPEV LADSPRLAHV FDNLLANALR HTPPRGAVTV SAISEVGMVR FLVTDSGCGV AVEDRTQVFE PFWRGTGQCP DSGVGLGLTI VREIVRAHNG EVGVAGAPGG GAVFTFTLPA VERPPARPDT TLGACP
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