Gene Mmc1_3601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3601 
Symbol 
ID4483431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4521219 
End bp4523099 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content61% 
IMG OID639724350 
Productalginate biosynthesis sensor protein KinB 
Protein accessionYP_867492 
Protein GI117926875 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGAA TCCGGTCAAA AATTCTGGCC GTGTGGGTGG TCATGCTGGC CACCGTGGCG 
GGGTCTGGGC TGGTGATCCT GGCCCATCTC ACCGAACTCG GCGAGGCGGT GGATGTCATT
CTGCGGGAGA ACTACCGCAG TGTCATCGCC AGCCAAGAGA TGAAGGAGGC GCTGGAACGT
ATGGACAGCG GCGTGCTGTT CCATTTTGCC GGACGTGGGC ATGAAGGTGC CGCTATCCTC
GACGCAGGCA TTGCCGACTT CCGCAAGGCC CTGGATGTGG AGATGGGCAA CATCACCCTG
CCAGGTGAAC AGGAGACAGC CGAACGGCTC TCCCGAGCGT TCGACGCGTT TATTGAAACC
ATTCCCACCG TGGTTGATCC CGCTCGGGAG GAGGCGTCCC GCCGGACCGA CTATTTTGCC
CGCCTGTTGC CGCGTTTTCA GGAGATCAAA TCCCTGGCCA ATGCGCTGTT GGAGATGAAC
CAGAGTAACA TGTCCGAGGC CAATGATCGT GCCCGCGCCA AGGCAGCTCT GACCGCTCGG
GTGATCCTGT GGTCACTGCT CGCTTGCGGC TTGACAACCA TACTCTTTGG TCATCTGATC
CAGCTCTGGA TTCTGCACCC AATACGCCAT TTGACCCGTT CGGTGGAGGA GATTCGGGGC
GGCAACTTCG ATCTGGTGCT CTCCGTTGGC GGGCGCGATG AGTTTGCCCG TTTGGCCAGC
GGGTTTAATG CCATGGCTGC CACGATCCGC GAACTGCGCC GCCGCGACCA ACGGGACGTG
GCACGCAACC GGCAAGCTAT GGGCGAGGTG TTCCAGGCAC TGCCGGTGAC GGTGGCAATC
GTGGATGCAG AGGGCCGCAT AGAAGAGGCC TCCACTTTAG CAGAGCATTG GTTCGGATTG
AAATCTGGAT TGCCACTGCG TGAATCTGGC TTGGAGATGA TCCAGGAATT GGCTGAAAAA
GCGCTGTTGG AGGCCACGCC CCAAGAACCC CCTAATCCAG ACGACCTGAT CCAGCGATTC
GTGGATGGCG AGGAACGGTT TTTTCGTCCA CTGGCCACTC CCATCCACTC CCTGACAGAG
AACCAGACCG GCACCGCCAC CGAACCTGTT GGTGTGGCCA TCATCCTCAA GGACTTCACC
CAAGTCAGAG AACAGCGGGA GCTGAAGCGT AGTGTGGTAG GCACGGTCTC CCATCAGTTA
AAGACGCCGC TAACGGCCTT GCGTATGTCC TTGCATCTGC TGCTACAGGA GGCGTCGGAA
CCACTGACGG CGCGTCAGGA GGATCTACTG CAAACAGCCC GGGACGAAAG TGAACGCATG
GTGAAGATCC TCGATGACCT GCTGGACATT CACCGAGCCG AGGCCGGATT CAGAAGGCTC
AACCGAGAGG CGGTCCGTCC CCAGTGGTTG GCGGAAGAGG CCACGCGCAT CCATCAAGAG
GACGCCAACC GGCGCGGAAT CGCGCTGAAT GTTCGGGTTC CTGCCGATCT TCCAGAGGTG
TTGGCGGATT CCCCGCGCCT GGCGCATGTC TTCGACAACC TATTGGCCAA CGCGCTGCGC
CATACCCCAC CCAGAGGCGC GGTGACGGTC TCCGCCATTT CCGAAGTAGG CATGGTCCGG
TTCTTGGTGA CAGACAGCGG TTGCGGCGTC GCCGTGGAGG ATCGGACGCA GGTCTTTGAA
CCCTTCTGGC GTGGCACGGG CCAGTGCCCC GACAGCGGAG TAGGCCTAGG CCTGACCATC
GTGCGGGAGA TTGTCCGTGC TCATAATGGC GAGGTCGGCG TAGCAGGCGC TCCAGGCGGC
GGAGCCGTCT TCACCTTTAC CCTGCCCGCA GTGGAGCGTC CGCCAGCACG GCCAGACACC
ACGCTAGGAG CCTGCCCATG A
 
Protein sequence
MYGIRSKILA VWVVMLATVA GSGLVILAHL TELGEAVDVI LRENYRSVIA SQEMKEALER 
MDSGVLFHFA GRGHEGAAIL DAGIADFRKA LDVEMGNITL PGEQETAERL SRAFDAFIET
IPTVVDPARE EASRRTDYFA RLLPRFQEIK SLANALLEMN QSNMSEANDR ARAKAALTAR
VILWSLLACG LTTILFGHLI QLWILHPIRH LTRSVEEIRG GNFDLVLSVG GRDEFARLAS
GFNAMAATIR ELRRRDQRDV ARNRQAMGEV FQALPVTVAI VDAEGRIEEA STLAEHWFGL
KSGLPLRESG LEMIQELAEK ALLEATPQEP PNPDDLIQRF VDGEERFFRP LATPIHSLTE
NQTGTATEPV GVAIILKDFT QVREQRELKR SVVGTVSHQL KTPLTALRMS LHLLLQEASE
PLTARQEDLL QTARDESERM VKILDDLLDI HRAEAGFRRL NREAVRPQWL AEEATRIHQE
DANRRGIALN VRVPADLPEV LADSPRLAHV FDNLLANALR HTPPRGAVTV SAISEVGMVR
FLVTDSGCGV AVEDRTQVFE PFWRGTGQCP DSGVGLGLTI VREIVRAHNG EVGVAGAPGG
GAVFTFTLPA VERPPARPDT TLGACP