| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3534 |
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| Symbol | |
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| ID | 4480385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4432066 |
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| End bp | 4433247 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724283 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_867425 |
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| Protein GI | 117926808 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA TCTCACTAAT TCCTGCCACT TTATTGTTGG TGGAGGATGA CCCTGACCAA
CGCATTATCA TGCAGCGTAA ACTGCAACAG CAGGGTTATA AAGTCATTTG TGCTGAAAAT
GGCGAAGAGG CGGTTGATCT ATACAACAAC AACACCATTG ATTTGGTATT GATGGATGCC
CAGTTGCCGG GCATGGATGG TTTTGAGGCT TGTTTTCTCA TCACGCATAC GGAAACAGGT
TCACGTTGTC CGGTCATGAT GATCACCAGC TTGGAGAATT CTGAATCTGT GGACCGTGCC
TTTCAAGTGG GGGCGGAGGA GTATGTTCCA AAGCCGATTC ATTGGAAGGT GTTGATGCAG
CGTATACGTC GGCAGATTAA ATCGCGCCGG GTTCACCAAG AGGTTGTACA GGCCCGAGAT
GCGCTTTCAC AAGCTTATTC AGAAGTGACA GAGGTTCGTG AGCGTTTATC TTTTGAGCGC
CGTTTGGTTG AAGAAATCGT CTCTCGTATG CGTCAATCAG CTCCGATTAA CAGGCATAAC
TTGCGGACTC TGTTTAATCC TGTTGAGGCA ACCTCAGGTG ATATTATTTT ATCGGCCATC
CGTCCAGACG GTGCCCAACA TGTGATGATG GGGGATGCAA CTGGCCATGG ACTACCTGCT
GCGATTATCG GCCCGTTGGT TTCAGACATT TTTTACAGTA TGACCAACAA GGGCATGGCC
CCTGCGGTAA TTTTGAGTGA ACTGAACAGC CAGTTGAATG CTAAGCTACC CACCGGTATT
TTTTTGGCCT GTTGCTGGAT CAGTTTAAAC AGCAGTCGAG ACCATTTAGA GTATTGGAAT
GCGGGAACCC CCGATATTTT AATGGTGCGT CAAGGGAAGA TTTTCAAGCG CGGGCAGTCG
TGCAATATAC CGTTGGGTGT TTTGCGAGCA GGCGACTTTT CACCAACACT GCATACCGTC
TCCGTTCAAG CTGGAGATCA AATTTATGCC TATTCCGATG GCATCGTCGA ATGCAGAGAT
CCCCAATTGG AATTTTTTGG GCAAGAGGCT ACCGACGCTC TACTCTTAAA TACGGCAACC
CATAGGGAGA CCCCTTTGAC CGCGATCACT GATCAGTTAG AGGCTTTTCA TGGAAGTGCC
ACATTTGGGG ATGACGTGAC CCTTATCGAA ATCACCTGTT GA
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| Protein sequence | MSEISLIPAT LLLVEDDPDQ RIIMQRKLQQ QGYKVICAEN GEEAVDLYNN NTIDLVLMDA
QLPGMDGFEA CFLITHTETG SRCPVMMITS LENSESVDRA FQVGAEEYVP KPIHWKVLMQ
RIRRQIKSRR VHQEVVQARD ALSQAYSEVT EVRERLSFER RLVEEIVSRM RQSAPINRHN
LRTLFNPVEA TSGDIILSAI RPDGAQHVMM GDATGHGLPA AIIGPLVSDI FYSMTNKGMA
PAVILSELNS QLNAKLPTGI FLACCWISLN SSRDHLEYWN AGTPDILMVR QGKIFKRGQS
CNIPLGVLRA GDFSPTLHTV SVQAGDQIYA YSDGIVECRD PQLEFFGQEA TDALLLNTAT
HRETPLTAIT DQLEAFHGSA TFGDDVTLIE ITC
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