| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3512 |
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| Symbol | |
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| ID | 4481109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4387116 |
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| End bp | 4388942 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724260 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_867403 |
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| Protein GI | 117926786 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCG CTGTGCAAGC ATGGATTGTT TTAGGGATCA TTGTTGTTGC GGTGGTGCTC
TATGCCCAGG GTCGTCTGCC GATGGATTTG GTATCCCTGG GTATTCTGGC GCTCTTGGCC
ACGATCTTTC AGCTGGTACC ACTCAGGGAT GCCACCGGCA AGGTGGTTTT GGATGGGGTC
GATTTTTTTC AGGGTTTAAG CAACCCCGCG CTGATCTCTG TGGCCACCCT GCTGGTGGTT
GGGGAGGGCA TTACCCGCAC GGGAGCCCTA ACCTCGGTCT CCACCTGGAT TGATCGCAGG
GCGGATGGTT CCTGGACCAA AGCGTTTTCA TTGGTTTTGA TCATTACCGC GTTAGCCAGT
GCTTTCATGA ACAACACGCC GGTGGTGGTG ATTTTTATTC CCATTTTGGC CGGTTTAGCC
AGTCAGTATA AGATCCACTC CCGCAAAGTT TTATTACCCC TCTCCTACAT CTCCATTTTG
GGGGGGGCCT GTACGTTGAT CGGCAGCTCT ACCAACCTAT TGGTGGCTGA TTATGCCGAG
CGTATTTTAG ACCACAAAAT GAGCATGTTT TCCCTTACCC CTGTGGGGAT TGTCTTGTTG
ATGGCCGGTC TTGCATACCT TATTTTCTGG GCACCTAAGT TGATTTCGGA TGAGGGGCCT
ACGCCTCAAT CGGGTGATCC TGTGACCCTG CGTCTGTTTA CGGCGGAGAT GCGGGTGGAT
GAGGGGTGCC CGCTGATTGG ACAGCTTTTA AGCAAGCTGC AACAGGATAT TTTTGCCAAT
GTCACGGTGT ATAAGCTGAT ACGTGGTGCT TTGGTGGACT ATACCGCCCC GTTTAAAGAG
ATTGTCATCA AGGCGGGGGA TATTTTGTTG GTACAGGGCA CGGTTACGGA GCTTAAGGCT
GCGGAGTTTC GGGGTGGCAT TACCATTACC CCGTACATGC CGGGCATGCC CCTTTCGGAG
CAGGACAAAA AGCGGCGCAT GTTGGCTGAG TTGGTGATTA CGCCTGATTC GCGCATGGTG
GGGTTGACGT TGACGCAGGT GCGCATGCGC CGTCAATTTG GGGTGGCGGT GGTGGCGATC
AACCGCCCTG CGCGGGAGAT CAAGGGGCGG GTGATTGACA CCCCTTTACG CCCGGGGGAT
CTGTTGTTGG TGGAGGGGAT TCCGGAACGT ATTGAGAGTT TTTCCACCAG CCGTGATTTT
TTGCTCTATT GGGGGGCACA CAATGCGGTT AGGCAGCCGC AAAAGGCCCG TGCGGCGGCG
GGGATCTTGT TAGGGATTAT TCTGTTTGCG GCGTTGGATA GTCACGCCAT GCCGGTGTTG
GCGACGGTGG GGGCGACGCT GATGTTGGCG TTTCGCTGTT TAACGCTACG GCAGGCCTAT
AGTGCGTTAT CGTCTAAGGT GGTGTTGTTG ATTACGGCAT CGTTGGCCAT GGGCACGGCG
ATGCAGGGCA CGGGGGCGGA TCAGTTGGTG GCCCATGGTT TTTTATGGAT GGTAGAGGGT
TATTCGCCGT GGGTGGTGTT GGCGGCTTTT GGTTTTATGG TCACGGTGTT TACCAATGTG
ATTAGCAACA ATGCCACGGC GATTTTGTTT GCGCCCATTG GGGTTGCCAT TGCAGAGGGT
TTGGGGGTGA GTTTTATGCC CTTTTTGATG ATGGTGATTT TTGGGGCCAA TGCGGCTTTT
GCCTCGCCCA TTGGGTATAA GACCAATTTG CTGGTCTTTA GTGTGGGGGG GTATCGTTTT
GCGGATTTCT TTAAGGTGGG TTTGCCGTTG AATGTTGGCT ATTGGCTCTT ATCGACTTTG
TTGATTCCCT TAATGTGGGC TTTTTAA
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| Protein sequence | METAVQAWIV LGIIVVAVVL YAQGRLPMDL VSLGILALLA TIFQLVPLRD ATGKVVLDGV
DFFQGLSNPA LISVATLLVV GEGITRTGAL TSVSTWIDRR ADGSWTKAFS LVLIITALAS
AFMNNTPVVV IFIPILAGLA SQYKIHSRKV LLPLSYISIL GGACTLIGSS TNLLVADYAE
RILDHKMSMF SLTPVGIVLL MAGLAYLIFW APKLISDEGP TPQSGDPVTL RLFTAEMRVD
EGCPLIGQLL SKLQQDIFAN VTVYKLIRGA LVDYTAPFKE IVIKAGDILL VQGTVTELKA
AEFRGGITIT PYMPGMPLSE QDKKRRMLAE LVITPDSRMV GLTLTQVRMR RQFGVAVVAI
NRPAREIKGR VIDTPLRPGD LLLVEGIPER IESFSTSRDF LLYWGAHNAV RQPQKARAAA
GILLGIILFA ALDSHAMPVL ATVGATLMLA FRCLTLRQAY SALSSKVVLL ITASLAMGTA
MQGTGADQLV AHGFLWMVEG YSPWVVLAAF GFMVTVFTNV ISNNATAILF APIGVAIAEG
LGVSFMPFLM MVIFGANAAF ASPIGYKTNL LVFSVGGYRF ADFFKVGLPL NVGYWLLSTL
LIPLMWAF
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