| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3459 |
|---|
| Symbol | |
|---|
| ID | 4482815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4320359 |
|---|
| End bp | 4321237 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639724207 |
|---|
| Product | ATP synthase F1, gamma subunit |
|---|
| Protein accession | YP_867350 |
|---|
| Protein GI | 117926733 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACT TAAAAGCCCT GAAAGTACGG ATCGGTTCCG TCAAAAATAC CCGGCAGATC
ACCAAGGCTA TGAAAATGGT TGCGGCCGCT AAGCTGCGTA AAGCAACCGA ACAGGCCGAG
TCGGCCCGTC CTTACAGCAA ACGTATGAGC CGTATGATGC ACTCATTGGC CCCTGCTGCT
GCTGGACGGG ACAACGCTCC TGAGCTGCTG GTGGGGCGTG GTGATGTTAA AAAAGTAAAC
TTGGTTGTCT ACACCGCAGA CCGCGGTCTG TGTGGTAGTT TTAATAGCGT GGTAATCCGC
GCCACCCGTG CCCGTATCGC AGAGCTAGAA AAGCAAGGTT TTCAAGTCAT GCTTACCTTC
ATTGGTCGCA AGGCTTATGA TGTGCTTAAA CGCTCTCACG GTCATCTGGT GCGTAAGGTC
TATACCGAGA TGTCACGCCA TATGAGCTTT GCTTATGTGG AAAAAAACAT CGTAAAAGAG
CTTATCAAAG ATTTCCACGA AGGCCAGTTT GACGCCTGTT ATCTGGTGTT TAACCAGTTT
AAATCAGCCA TGAGCCAAGA GCTGACCTGG GCACAGAGCA TTCCTCAACC CATTGATACC
GAGGGTGCTT CTACCCAAAC CGGATATCAG TTTGAGCCGG TTGAAGAAGA GCTGCTCGAA
GAGTTGTTGC CCCGTAACTT GGCTGTGCAG GTGTTTCAAG CTTTGGCCGA ATCCGAGGCT
TCTGAGCATG GTTCCCGTAT GACCGCAATG GATAACGCGG TGCGTAACGC GGGGGATATG
GTCAAGAAGC TACAGACCAA ATACAACCGT TCCCGACAGG CGGCCATTAC CACCGAGTTG
ATCGAGATCA TCAGTGGTGC TGAATCCCTG AAAGGTTGA
|
|---|
| Protein sequence | MANLKALKVR IGSVKNTRQI TKAMKMVAAA KLRKATEQAE SARPYSKRMS RMMHSLAPAA
AGRDNAPELL VGRGDVKKVN LVVYTADRGL CGSFNSVVIR ATRARIAELE KQGFQVMLTF
IGRKAYDVLK RSHGHLVRKV YTEMSRHMSF AYVEKNIVKE LIKDFHEGQF DACYLVFNQF
KSAMSQELTW AQSIPQPIDT EGASTQTGYQ FEPVEEELLE ELLPRNLAVQ VFQALAESEA
SEHGSRMTAM DNAVRNAGDM VKKLQTKYNR SRQAAITTEL IEIISGAESL KG
|
|---|
| |