Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3442 |
Symbol | |
ID | 4483174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4298304 |
End bp | 4299701 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724190 |
Product | Na+/H+ antiporter NhaD |
Protein accession | YP_867333 |
Protein GI | 117926716 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCAG CATGGTCTGT GGTCGGTGGA TCGTGCCCCA CTCTCTTATT GGGTTCAAAG GATCATATCA TGGTAAATAA AGGGGTTATG GCCATTGTCA TGGTGGCTTT GGGGACTCTG TTAGGTGCAG GAGAGCTGTG GGCTTCCGAT GGGACGGGCG GCCATTTGGA TCTGACCCAT ACGATGTATG GCTATCTGGC CATACTGCTG TTTGTGGTGG CCTACGGTTT GGTCATGACA GAAGAGTATA CCAAGTTACG CAAATCCAAG CCTGTATTGT TGGCGGCGGG TCTTATTTGG GTATTGATTG CCGCTGCCTA TGTGAGTAAC CACATTCCCC ATGTGGCAGA AAAGGCCATG CGCCATAATA TTTTGGAGTA TGCCGAGCTG TTTCTGTTTC TGTTAGTGGC CATGACCTAC ATTAATGCCA TGGAAGAGCG TTTGGTGTTC GAGTCGCTAC GTGCTTGGTT GGTGCGCGCG GGTTATGGTT TTCGTAAGCT GTTTTGGCTG ACGGGGATTT TGGCCTTTTT TATCTCGCCG GTGGCCGATA ACCTGACCAC GGCGCTACTG ATGTGTGCGG TGATCATGGC GGTGGGTCGG GACAATGGTA AATTTGTCAC CCTCGCCTGC ATTAACATTG TGGTGGGGGC CAACGCGGGT GGGGCCTTTA GCCCTTTTGG GGACATTACA ACCCTGATGG TGTGGCAAAA GGGTGTGGTG GGTTTTGGCG AATTTTTCCA GCTCTTCTTG CCCTCGGTCA CCAACTTTCT GGTACCCGCC TTGATCATGC ACTTTGCGGT GCCCAATCTT AAACCAGCCA GCAGCAATGA AGTGATTTTG ATCAAGCGGG GGGGACGGCG CATCGTGGGG CTGTTTCTGT TGACCATCTT GACGGCGGTG AGTTTTCACA GTGTGCTGGA ACTGCCCCCG GTGGCGGGCA TGATGACCGG TCTAGCCTAC CTAAAAATCT TCTCTTACTA CCTGAACAGA ACCATGAATC GGGGCCGCAA GGGGCAGGGT TTGGCGGGCG AGCCAGAGGC CGAAGAGGAG ACCTACTTTG ACGTTTTTCA AAAGATCGCC CGTGCCGAGT GGGACACCCT GATGTTCTTT TACGGGGTGA TCATGTGTGT GGGTGGTCTG GGTTTCATCG GCTATCTGAC CATGCTCTCC CACCAGATGT ATGGTGGTAT GGGCCCTACC ATGGCCAATG TGTTGGTGGG TGTTCTTTCA GCGGTGATTG ATACTCGATG TTCAAGTTTT CTGCGCTTGA CATCTGAGGG GAAAAGGGCA GCAGTGTCAT CCCGTCGGAC TCTGGATCAA GATTCAATCG AGACCCTTCA TTATCTGACG GGCTGGCCTG CTGCCCCTGC TTTATTTTAC ACTTTCCTCC AGGGATGA
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Protein sequence | MPPAWSVVGG SCPTLLLGSK DHIMVNKGVM AIVMVALGTL LGAGELWASD GTGGHLDLTH TMYGYLAILL FVVAYGLVMT EEYTKLRKSK PVLLAAGLIW VLIAAAYVSN HIPHVAEKAM RHNILEYAEL FLFLLVAMTY INAMEERLVF ESLRAWLVRA GYGFRKLFWL TGILAFFISP VADNLTTALL MCAVIMAVGR DNGKFVTLAC INIVVGANAG GAFSPFGDIT TLMVWQKGVV GFGEFFQLFL PSVTNFLVPA LIMHFAVPNL KPASSNEVIL IKRGGRRIVG LFLLTILTAV SFHSVLELPP VAGMMTGLAY LKIFSYYLNR TMNRGRKGQG LAGEPEAEEE TYFDVFQKIA RAEWDTLMFF YGVIMCVGGL GFIGYLTMLS HQMYGGMGPT MANVLVGVLS AVIDTRCSSF LRLTSEGKRA AVSSRRTLDQ DSIETLHYLT GWPAAPALFY TFLQG
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