| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3411 |
|---|
| Symbol | |
|---|
| ID | 4483810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4264183 |
|---|
| End bp | 4264659 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724160 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_867303 |
|---|
| Protein GI | 117926686 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3431] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA AACCGCCTAA CCTGTTTTGT AAAGAACGCT TATTGCCCTA TTTTTACCAT
GTTACCAATG CGGTTTTTGG GGTTATCTTG CTCTTCTTGA CCCTGGGTGT GGTCATTGGG
GCCGGTAAAC TGTTTTTGGG CCTGAGCGAT CTGCTGCTGA CAGGCGGCCT CGCAAACAGC
TATCACACCT TAATTGCCGA TGTGCTGTCG CTGTTTATCC TCATTGAGCT CTCCCGCTCT
TTGGTGGAAT ACTTCGAGCA AAAACGCCTG CGTTTGGTGT TTATTGTGGA TGCCGCCATT
GTGTTCGTCC TGCGGGAGAT CATGATTAAG CTGTTCCAAG AAAAAATGCA TACCGAAGAG
ATCTATGCCT TTAGTGCCTT AATCCTGGCC TTAGGGGTCA TTCGCGCCTC ATCGGTCGTA
TTCTCCCCCA GTCACGCCCT ACCTAAGCAG GCTGAGCGCA GCCCTGGGAC AGCGTAA
|
|---|
| Protein sequence | MLEKPPNLFC KERLLPYFYH VTNAVFGVIL LFLTLGVVIG AGKLFLGLSD LLLTGGLANS
YHTLIADVLS LFILIELSRS LVEYFEQKRL RLVFIVDAAI VFVLREIMIK LFQEKMHTEE
IYAFSALILA LGVIRASSVV FSPSHALPKQ AERSPGTA
|
|---|
| |