Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3296 |
Symbol | |
ID | 4482266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4108502 |
End bp | 4109923 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639724046 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_867191 |
Protein GI | 117926574 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0160978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACCA AGGGTGCCCC ACATAGCGGG TCAATGGCCG TGTTAACGGC TCTGCAAGCG CGGCTGGGGG CACACAAGGT GCTGCGGGAT GGTGCCCATT TGGAGTCCTA CGCCTGGGAC AATACTGGCC TGTATGCCCG CCCCGACGGG GTGGTATTGG CGAGCACGTT GCACGATGTC CAGACCACCT TGGCGCTCTG TCATGCACAT CGTGTGGCGG TAACACCGCG CACAGCCGGT ACTGGCAATG TGGGGGGGGC TTTGGCGGTG GAGGGGGGGA TTGTGCTCTC CTTGCAGCGT ATGAACCGTA TTCTTGAGAT CAACCCGGCT GACCGTTTGG TGGTGGTGGA GCCTGGGGTG GTTAATGCCG ATTTACAAGA TCAGTTATCG GCCCATGGCC TGTTCTGGCC GCCCAATCCT TCCTCTTCAA AAAGTTGTGC TATTGGTGGC AATCTGGCCA TGTGTGCGGC GGGTCCCAAT GCGGTGCGCT ATGGGGTGGT GCGTGATTGG GTGCTGGGGT TGGAGCTGGT CACGGCGGAG GGTAAGGTGA TGCGTACCGG CTCGCGCTGC TCGAAGAGCG TGACAGGTTA CGATATGACC CGGCTGTTGG TGGGTTCGGA GGGCACGCTG GGCGTGATTA CACAGGCGAT TCTGAAACTT ACCCCAAAGC CTGCGGTCCA ACTTACAATG CGCGTTGTTT ATGCAAGCGT GACGGCAGCG GCCCAAGCGG TGAGTGCCAT TATGGCTGCG GGTGTGCCGC CGTCGGCGCT GGAGTTTATG GATAGCTCCT GTTTGGGGTT GCTGCGCCAA GCGGGCATGG CCATACCGGC CCAGGGTGCC GCTTTGCTGC TGTTGGAGGT GGCCGACGAG GTGACGCGGG TTGAGGGTGA AGTGGCGCGG TTGCAGGAAA TTTTACAACG TTACGCGCCG TTAGAGCTGG TGGTGGCGCG GCAGGCTGCT CAGGCTAAGG CGGTGTGGGC GGCTCGCTAT GCGCTCTCAC CCTTATTGAA AAACTTGGCC CCTAAGCGCG TTAATGAAGA TGTGGCGGTT CCGGTTTCGC GTCTACCGGA GCTCATTGAG GGGTTACAAC GCATCGCCGA GCGGGTGGAT TTGCCCATCG TTAATTTTGG CCATGCGGGT AATGGCAATA TTCATGTTAA TCTGTTGGTG GACCCGGAAG ATTCTGTGGT GATGGCCCGT CTGCCCGATG CGTTGGATCG GGTGTTTGAT CTGGTGGTTA AGCTGGATGG TACCCTCTCT GGTGAGCACG GTATTGGTTA TCAAAAAAGG GACTATCTGG GTTGGGAGTT GGATGCGGAG AATCTGGCGA TGCAGCGGCG TTTAAAAGCG CTGTTTGACC CTAATGGAAT TCTAAATCCT GGCAAGCTCT TTTCACCCAA GCCAAGGGCA ACCTTGGTGT AA
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Protein sequence | MNTKGAPHSG SMAVLTALQA RLGAHKVLRD GAHLESYAWD NTGLYARPDG VVLASTLHDV QTTLALCHAH RVAVTPRTAG TGNVGGALAV EGGIVLSLQR MNRILEINPA DRLVVVEPGV VNADLQDQLS AHGLFWPPNP SSSKSCAIGG NLAMCAAGPN AVRYGVVRDW VLGLELVTAE GKVMRTGSRC SKSVTGYDMT RLLVGSEGTL GVITQAILKL TPKPAVQLTM RVVYASVTAA AQAVSAIMAA GVPPSALEFM DSSCLGLLRQ AGMAIPAQGA ALLLLEVADE VTRVEGEVAR LQEILQRYAP LELVVARQAA QAKAVWAARY ALSPLLKNLA PKRVNEDVAV PVSRLPELIE GLQRIAERVD LPIVNFGHAG NGNIHVNLLV DPEDSVVMAR LPDALDRVFD LVVKLDGTLS GEHGIGYQKR DYLGWELDAE NLAMQRRLKA LFDPNGILNP GKLFSPKPRA TLV
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