Gene Mmc1_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3233 
Symbol 
ID4483735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4026118 
End bp4026672 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID639723983 
Producthypothetical protein 
Protein accessionYP_867129 
Protein GI117926512 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.826377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.18333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTG TGCTGTTTGT GGGGGATCGT TTTGTCGCTG GGGTAGGGGA TCCAGCGTAT 
GCCGGTTGGG TGGGACGTTT GTGCGCCGCC AGTCGGGCGG ATTTGACCCT CTCTAATCTA
GGCGTGCGTC AGCAGACCAG TGTAGAGATC GCCCAGCGCT GGCATGCCGA AGCGGTCACG
CGGTGGGCCA ATGATGCGCC ATATGGGCTG GTGTTTGCCT TTGGGGTTAA TGATGTGGTA
GAGCAGCAGG GGATGCTCCG TGTCGGCCAT GAGGAGAGTT TGGCGGTCAC GAGGCTTATG
TTAAGCCAAG CGCAAACCTT GGGGCCGGTG TTGCGGATTG GCCCGCCGCC GGTGGCGGAT
TCTGCCCTCT GTGCCCGTTT GCAGGGGTTG GATGCGGGCT TTGCCGGGGT GGCCCAAGGG
TTGGGCGTGC CCTATCTGTC GGTATTGGGG CCACTGCTTC GCCATGAGAC CTGGATGCAA
CAGGTGGCGT TGGGGGATGG TGCCTATCCC ACTGGTGAAG GGTATGCCGC TCTGGCTGAG
CTGGAGGCCG GGTGA
 
Protein sequence
MMRVLFVGDR FVAGVGDPAY AGWVGRLCAA SRADLTLSNL GVRQQTSVEI AQRWHAEAVT 
RWANDAPYGL VFAFGVNDVV EQQGMLRVGH EESLAVTRLM LSQAQTLGPV LRIGPPPVAD
SALCARLQGL DAGFAGVAQG LGVPYLSVLG PLLRHETWMQ QVALGDGAYP TGEGYAALAE
LEAG