| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3020 |
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| Symbol | |
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| ID | 4483531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3778648 |
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| End bp | 3779580 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723767 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_866917 |
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| Protein GI | 117926300 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CGCTGCGTTA TCTGACGTTG CTGGCTGCTG GCCTATTGAG CAGCACCCCC
GCTTTGGCCG CTGGCTGGCT AGGGGCCAGC CTCAACACGC CACGCGGGGT CCAAGTAGGC
GAGATTATTA AGGGCAGCCC GGCCGATCAT GCTGGTTTGG AGCCCGAGGA TATTATTTTG
GAATTGAATG GGCAGGCCAT TCACGGCCCC GGCCAATTTG CCCGCCGCAT CGCCACCACC
AAACCGGGTA CCCGCATCAC CCTAAAAGTG ATGCGTAAAG GCAAGCTCAC CGAGCTAAAA
ACCACCCTGG AAGATAGCAA AGACCATGCA AGCGTAACCT CCTACATGGG GGGGCCTATG
GGGAGCATGT TAGAGACCCC CAATCAAATG ATGCGGAGCA TGCCTTTTCC ACCCATGCGC
GGCAATCCTG ATGCTTATGG CGCTCCGGGC GGGGCGTATG GGCCCCCTCC CGGCGGGCGT
AACCAAGGCG GCTTTGGCGG CGAAGATTTT GGCAATCGGC CACCCCCTCC TGGTCAGGGC
GGTTTTGCCC AAGCTGGCGA GGCGAACGAC CTTGCTTTCA CCCCTCCCCC GCCACCCCCT
AACGATCAAC GTCAGGGCGG GTTCGGCCCA CCGCCTCACC TGCGTGGCAT GCCCATGGAT
ACCAACAAAG CGTGGTTAGG TATCGCGGTA CAGAACAGCG CCGCTGGGGT TGTGCTGGAA
GGGGTAGCCC CCACCAGCCC CGCCGCCAAG GCAGGCTTAC AGGCCGGGGA TCGCATTGAA
AAAATCAATG ACACCCCCAT CACCGGGGAC CAACAACTGG TGCAGAGCTT AGCCCCCTTA
CAGCCCGGGC AAAAGCTGAC GATACACTAT GTTCGTGACG GCAAATCAAA CGCCGTGGTG
GTGGATCTGG TTAGCCGCCC AGCCCATCCG TAA
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| Protein sequence | MKKPLRYLTL LAAGLLSSTP ALAAGWLGAS LNTPRGVQVG EIIKGSPADH AGLEPEDIIL
ELNGQAIHGP GQFARRIATT KPGTRITLKV MRKGKLTELK TTLEDSKDHA SVTSYMGGPM
GSMLETPNQM MRSMPFPPMR GNPDAYGAPG GAYGPPPGGR NQGGFGGEDF GNRPPPPGQG
GFAQAGEAND LAFTPPPPPP NDQRQGGFGP PPHLRGMPMD TNKAWLGIAV QNSAAGVVLE
GVAPTSPAAK AGLQAGDRIE KINDTPITGD QQLVQSLAPL QPGQKLTIHY VRDGKSNAVV
VDLVSRPAHP
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