Gene Mmc1_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3006 
Symbol 
ID4483237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3761165 
End bp3761590 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content55% 
IMG OID639723753 
ProductNUDIX hydrolase 
Protein accessionYP_866903 
Protein GI117926286 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAC GTGCCACCCT CTCGGCCCAC GCCTTTGTGA TGGATGTCCA GCCTGGGCAA 
GCAACCCGAC TGCTGTTGGT CCAACTTAAC TATTCGGACC AACGGCGCCA TAAATGGGCT
TTGCCCGGTG GCTTTGTGGA TCAAGGTGAG ACCATTGAAA AGGCATTACA GCGGGAGGTC
GCCGAAGAGG TCGCCCTTAC GTTGAACCAA TGGCAGCAAT TTTCGGTGGT CCCCTTGCTG
CTTTGCGAGC TTCCCCATGT GGGGTTTTTA TTTCGCTGCG ATGGCTGGCA GGGCACACCA
CGGCTAACCA GTCGTGAACT CTGCGATCTA CGTTGGGTCG ATCGTGAAAC CTTTAATGCC
ATGGCCGACG CCGGCGAGCT GGCTTATACC GAGATGCGTA TTCAAGGGGA TTTACTCACG
TGGTAA
 
Protein sequence
MLVRATLSAH AFVMDVQPGQ ATRLLLVQLN YSDQRRHKWA LPGGFVDQGE TIEKALQREV 
AEEVALTLNQ WQQFSVVPLL LCELPHVGFL FRCDGWQGTP RLTSRELCDL RWVDRETFNA
MADAGELAYT EMRIQGDLLT W