Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2975 |
Symbol | |
ID | 4483493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3695396 |
End bp | 3697783 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723722 |
Product | hypothetical protein |
Protein accession | YP_866872 |
Protein GI | 117926255 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.549239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGCC AACACCCGCT GTTACAACTA TGGATTCTCT TCTGGGTCTG CACCTTGGCG CACCCGGCAC TCGCTCTGTT CGAGGAAGAA AAACGGGTTA TCCTAACCTT TTATAATGCA GAAAACGAGT TGGGCTACTT CTCTACCCCA GCCCACCAAA ATGCTGAGCA GCCCCTCAAC CATCTGGGCC TCACCCTGCG TCATCTCCCC ATCCAAGGGG GGCTGCCAGA TCTGCACAAG ATGCCCCACG TCCGGGGAAT TTTACTCTGG TTTGAAAATC CGCTACTCGA AGACCCCGCC GCCTTTTTAG AGTGGTGCAT TCGTGCCATG CGCGCCGGCA AGCGGCTTGT TTTAATAGGT CCCTTGGTCT TTAACAACGA CATTCACGAC AAACCGGCCC CCCAGCGTCT GTTAAAAACT TTTTGGAACA TGCTGGGGCT GGCGACCGAC CAAGATTGGC TGAGCGCCAC CCACAACCTA GAACTCACCT ATGATGATCC AAGTATTGTA CCCTATGAGC GGGACTATCA AGGCACTTTG GCGCAATACC AGCCCATTTA TAAAGTGCGT AAAGATGTAC GCCCACTCCT CACTGCGAAG TTAAAAGGGA GCGATGCCCC CCCGCATATT CTGGCCGCTA TCACAAAAAA TGGGGGGTAT GTGGCCGAAG GGTATGCCTT TTATTTGAGT AATGAAGAAG AGATTTTTCG CCAGTGGTAT CTCAACCCTT TCCGCTTTTT TCGAGACGCC TTTGCCACCC AAGCGATGCC CAAACCGGAT CACACCACCC TCTCTGGACG ACGCATCTTT TACAGCCACA TTGATGGCGA TGCTTGGCGC AGTGAAACCC GCATTAAAAA ATACCAACGC AAGGGGATGC GTTATGTCTC GGATGTTATT TTAGAAGAGG TGGTCAAAGC GTATCCCGAC CTACCGGTTA CGGTGGCCCC GGTGGTGGCG GACCTCGACC CGACCTGGTT TGGCCGCCCT ACCTTTATTA AGACCGCCCG AGAGATCTTC TCTTATAAAC ATGTGGAGGC CGGTAGCCAT ACCTACAGCC ATCCTCTTCA GTGGAGCTTT TTTGAAAATC CTGACCCCGA AGCCGAGCTC CCATTTTTGC ATCTTTACCC GCAACGGGAC CAAACCGACA TGGTGGATTA TCTGTTGCGC TCGGTAGGGT TACGCAAAAA TGAAGCCTCG GCCACACCGG ACTCTCAGGG TTGGAAACAG GTTGCCGCAA GAGCCCTACG CAAAAAGAAT GAACAGGCTA AAAAAGAGAC CCTTCAACTC TTTAACCATT ACGATATTCC CCGTGCCTTT GCGGTCAAGC CCTTTGACCT TAACCTAGAG ATCCAGGGCT CCTTTGATTT TATTAACACG CTGCTGCCCG CAAAAAAACG TGTCGAGGTG CTGCAATGGT CAGGGAATTG CGTACCCTTT GAAGCGGCCG TACGACAAAC CCGCGAAGCG GGGGTGCAAA ACCTTAATGG CGGCGATAGC CGCTTTGATC CCGAGTATCC CTCGGTGGCA TGGCTAAGTC CCTTTGGCCG CTATGTGGGC GACGAGGTGC AGATTTACGC CTCGGCCAGT AACGAAAACA CCTACACCGA TCTATGGACC GACCGCTTTT TTGGTTTCAT GCATCTGGTG GAAACCTTTA AAAACACCGA GACCCCCAGA CGTCTCCAGC CCATGAATAT TTATTACCAT ATGTATAGTG GAGAACGGGT TGCCAGCCTC AAGGCGCTGC GCCATAACCT GGACTATGCC CGTTCCCGTT CCTTAACCCC GGTCACCACC AGCCAGTTTG CTAGCATTAC CGCTGGGGCC ATGGTGGCAC GCCTCTACAG CGAGGGTCCC GACTTATGGC GGGTCGAAAA TCATGGCAAT CTTGGCACGT TACGCTTTGA TGACGCCTCA CTAAAGGTGG TCGACATGCC CCGTTCACAG GGCGTGCTTG GCTACCGTCA TTATCAGGGC AGTCTCTATG TCGCGCTGGA TAGCAGTGTC GATAAGCCCA TCATCGCGTT GGCGGAAAAC ACCACCCCAC ACCGCATCAC TGACGCCAAA ATGCCCTACT TGATTGACGC CCGTTGGTGG GTCTCCAAGC TTCAACGCGA GGGGGATGCT CAGTTGCGCT TTGCGGCACG TGGCTTTGGC GAGGGGGAAA TGCGTTGGAA AATGAGCCAA CCGGGGCTCT ACTACATCAC CATGGAGACC CCTGCGCAGA ACTGGCGCGA AGAGGTGCAG GTGCAGACCG ACGCTTTGGG TATTCTGCAT TTTAGTTTGC CGGCACGAGC CATTGATGGC GTCACCATCT CCATTGAGTT GGGCCAACCC TTGCAGCCCG CCGCCAATAG CCCCCACACC CAACAGGATG CCGCATGA
|
Protein sequence | MSRQHPLLQL WILFWVCTLA HPALALFEEE KRVILTFYNA ENELGYFSTP AHQNAEQPLN HLGLTLRHLP IQGGLPDLHK MPHVRGILLW FENPLLEDPA AFLEWCIRAM RAGKRLVLIG PLVFNNDIHD KPAPQRLLKT FWNMLGLATD QDWLSATHNL ELTYDDPSIV PYERDYQGTL AQYQPIYKVR KDVRPLLTAK LKGSDAPPHI LAAITKNGGY VAEGYAFYLS NEEEIFRQWY LNPFRFFRDA FATQAMPKPD HTTLSGRRIF YSHIDGDAWR SETRIKKYQR KGMRYVSDVI LEEVVKAYPD LPVTVAPVVA DLDPTWFGRP TFIKTAREIF SYKHVEAGSH TYSHPLQWSF FENPDPEAEL PFLHLYPQRD QTDMVDYLLR SVGLRKNEAS ATPDSQGWKQ VAARALRKKN EQAKKETLQL FNHYDIPRAF AVKPFDLNLE IQGSFDFINT LLPAKKRVEV LQWSGNCVPF EAAVRQTREA GVQNLNGGDS RFDPEYPSVA WLSPFGRYVG DEVQIYASAS NENTYTDLWT DRFFGFMHLV ETFKNTETPR RLQPMNIYYH MYSGERVASL KALRHNLDYA RSRSLTPVTT SQFASITAGA MVARLYSEGP DLWRVENHGN LGTLRFDDAS LKVVDMPRSQ GVLGYRHYQG SLYVALDSSV DKPIIALAEN TTPHRITDAK MPYLIDARWW VSKLQREGDA QLRFAARGFG EGEMRWKMSQ PGLYYITMET PAQNWREEVQ VQTDALGILH FSLPARAIDG VTISIELGQP LQPAANSPHT QQDAA
|
| |