Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2973 |
Symbol | |
ID | 4483491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3691713 |
End bp | 3693752 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723720 |
Product | diguanylate cyclase |
Protein accession | YP_866870 |
Protein GI | 117926253 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.439966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.101285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC CAGCGATAGA CCGATCCGCA AAAAAGGTTA TTAGGTCTGC CAGCCAAATA TTGGGCTGGC GGCTAAAGCC CCCTTTTACC CTGAAAAGCA TCATCCACCA CCACTATCTT AGCTCGGCGC TGTTCCCTAT ATTAGCCATC GATCTGGTTT TGTTGGTGCT CTATTTTGGT GTGACAGGCT ATCTATCCAA CCACAATGGC GCGGCATTGC GGCAAATTGC ACTGACCAAT TTGCACGGAT TTATGCTGCA AGAGGCCGAA TATTTGAACC AGCGGCTCTC TGAAATTAGC CGGACCGCGC GGATTTTGCA GGACCAACAG AGCCGTTTTT TCCAGATGAG CCCTTGGCAA AACCTCACGC TGCCCAATGG CGAGCCCCGC TTTGCGGTAC ATGCCAATGG GGTCTTTTAT AAGGAGGAGG ATAATGGTGG CAGTAGCCTC TACTATGCGG CCACCACCAA TATTGGGGAG GTGGAACGGC GCAAGGCGCG CGCGACAGAG TGGTTGGACC CTATGCTTAA ACAGGTGGTG GAGAGCCAAC CGCTGGTGGC TCAGGCTTAC CTGAATACTT TTGATAATAT GAACCGACTC TACCCCTTTC TATCCGATGC CCCAGGCATG TTTGGGCCAG AGTTAAATGT GACAAGCTAT AATTTTTACT ATTTGGCCGA TGCGCAGCAT AACCCCTCGC GTAATCCGGT ATGGACCACC ACCTATCTGG ATCCTGCGGG CAAAGGTTGG ATGGTCTCCT GTGTCGTACC TATCTACAGT GGCAATCTGC TGGAAGGGGT GACAGGGTTG GATGTGACGA TTCGGGATTT TGTCACTCAT GTGCTGGCTT TGCCGTTACC TTGGTCCGGT AGTGCATTTT TGTTGGATGA GCAGGGTAGT ATTCTTGCAA TGCCACCCAA GGTTGAGGTC ATTTTAGGGC TTAAAGAGCT TAAAGATCAC GACTATAAAC AGACCGTGGA CCGGACCATG TTACGCCCTG CATCCTATAA TATCTTGAAA CACGCCGATC CTATGGTGCA ACAGCAGTTT CACAAGTTGC TTGGTGAAGG GCAAGAGCAG GGTGTATTGG TAAGCAAAGG TGAGCGGTAT TTGATGGCGC ACCGAAAAGT ACCATTGACA GGCTGGCATT TGGTCACGTT GGTGGATGAG TCGGTGTTGC TGGCCTCCCA GGATGCCTTG GCCAGCTTGA TGTTGCGCAT TGGGCTATGG GTTGGCACGG CTGTGGTGGT TTTTTATGGG CTGTTTTTTA TCTATCTTAG CCGTAAATCC TTACGCTTGG CCGGGGTAAT CGCGCAGCCT TTGCTGCATT TGGCGCAGCA GGCTAAGCAG GTCGAGGCTC AGCAAAGTGG TGTGACATTG GCACCGGTTG GCGTGATGGA GGTGGACAGC CTAAGTGAAA GCTTTAATAG AATGGTGCAA ACCGTGCAAC AGCGTACAGA AAAGCTTGAA AGTACGCTCA TTGAGTCGCA ACTTCATGAA GAAAAAGCCA AACTTTATGC CAGTCAGGTC AGCACCGATA GCCTGACCGG ATTTTATACC ACAAGCGAGA TTGCGGTTTT TGCCCAGCGT GAAATAGCCC GAAGTCGTCG TTATTATCAA CCTTTCAGCT TGTTGTTGGT TAAGGGCGTA CGGTCTGACT TAAGCCAAGA ACCACACGCT TATGGGGCGA TGGCTTGGCT GAAAAATCTC GCTGAAGCAC TGGACGAACA GTTGCGGGAG ATTGATCTGG TTGGGCATTG GGGGGATCGC TTTTTGTTGG TGTTATTGCC CTCTACTGAA CTTGGGCAGG CCGCACAGTT AGCCAAGCGT TTGCAGGATG ATTTAAGCCA ACGGATGATG GAGGATCAAG AGGCCTTCCA ACTGAACATT GTTGTGGGTC AGTTGGGAGA CGAAACCGAG CTGGAACCCT TGTTGCAAAA GTTTCTGGAT GGGCTGGCCA GTGATGCAAA CGCACCTGAG CGACGGACTG TGGTGCTACA GATGGGTAGA GCGGTGCCGT TATCAACATA TTTAAAGTAG
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Protein sequence | MEKPAIDRSA KKVIRSASQI LGWRLKPPFT LKSIIHHHYL SSALFPILAI DLVLLVLYFG VTGYLSNHNG AALRQIALTN LHGFMLQEAE YLNQRLSEIS RTARILQDQQ SRFFQMSPWQ NLTLPNGEPR FAVHANGVFY KEEDNGGSSL YYAATTNIGE VERRKARATE WLDPMLKQVV ESQPLVAQAY LNTFDNMNRL YPFLSDAPGM FGPELNVTSY NFYYLADAQH NPSRNPVWTT TYLDPAGKGW MVSCVVPIYS GNLLEGVTGL DVTIRDFVTH VLALPLPWSG SAFLLDEQGS ILAMPPKVEV ILGLKELKDH DYKQTVDRTM LRPASYNILK HADPMVQQQF HKLLGEGQEQ GVLVSKGERY LMAHRKVPLT GWHLVTLVDE SVLLASQDAL ASLMLRIGLW VGTAVVVFYG LFFIYLSRKS LRLAGVIAQP LLHLAQQAKQ VEAQQSGVTL APVGVMEVDS LSESFNRMVQ TVQQRTEKLE STLIESQLHE EKAKLYASQV STDSLTGFYT TSEIAVFAQR EIARSRRYYQ PFSLLLVKGV RSDLSQEPHA YGAMAWLKNL AEALDEQLRE IDLVGHWGDR FLLVLLPSTE LGQAAQLAKR LQDDLSQRMM EDQEAFQLNI VVGQLGDETE LEPLLQKFLD GLASDANAPE RRTVVLQMGR AVPLSTYLK
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