Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2745 |
Symbol | |
ID | 4483047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3465799 |
End bp | 3467031 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639723490 |
Product | serine peptidase |
Protein accession | YP_866644 |
Protein GI | 117926027 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00202939 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAAA ACATGTTGCC CCATCTGGCA TCCCGGATTC TCGGGACGCC GCTTATGGTC GACCGCGCCC GTTTGGAGAC CATCCTCTCG GTCATTGGTC CCCGCGTCGG CTTGGAGCCA ACGGCCATGC CCAGCGGCTT TGAGCCCAAA GACCATAGCT CTGATTTGAT GGTCACGCCT AATGGAATCG CCATCGTGCC CATCCACGGC ACCCTGGTGA AACGGGTGGG GGCCGTCGAG GCTGCTTCGG GGCTCATGTC CTACGCATCC ATTGAAGAAA AACTGCTGGA TGCCGCCACC GATCCAGCCG TGCGAGCAAT CCTAATGGAT ATCGACTCCC CTGGTGGTGA GGTTGGGGGC GTGTTCGATC TGGCGGCCAT GATCCAGGAG GCGGGGCAGG GCAAGCCCAT CTGGGCGCTG GCCGATGATG CTTTTTCCGC AGCCTATCTC ATCGCCTCCC AGGCTCATCG CATTATTGTG CCCCAAACTG CGGGGGTGGG CTCCATCGGC GTCATAGCTG CTCATGTGGA TGAGTCGGAG AAGGATGCCA AAGAGGGGCG CAGCTACACC ACCGTGTTTG CTGGAGCCCA CAAGAATGAC TTCTCCAGCC ATGCCCCGCT GTCGGATGCA GCTCGCTTCA ACCTGCAACA GGAGGTCGAC CGCCTCTACG GCATGTTCAC CGGCATGGTG GCATCTGGCC GCAACATCAG TGAGACAGCG GTTAGGGCCA CTGAGGCAGG GCTCTTCTTT GGCGACAATG CCGTTAAAGC TGGCTTGGCT GACCATGTCG GCACCATCCG CGATGCCCTA GCGGGGCTCA CCACCCTTAT TGAATCTCCC AAACGAACAT TCATGCACAA ATTGGAGGCC ACTATGCCCA CCGATGATAC CCCTGTGTTG GATCTGCCCA TGGCTACCAC CACCCCACCT AAACCCCCAT CCAACGTCGT CGACCTGGAT CAGGTCCGTG CCGAGCATGG CAAACAGATG CGCAGTGAGG CTCAGGCTAT TGTCGATCTC TGTGCCCTGG CTGGCATGCC TCACTTGGCA GGCGGCTATA TCGCCGAAGG TACTGCTGCT GAGGCGGTAC GCAAAGAGCT ATTGGCCAAG CGGGCGGATG CTGAGGAGAT CCATTCCGAG GTGATGCCTG GTGATGGCAC CCGTATGCAG CCCAGACAGA GTCTTGAAAC CAACCCGGTG GTGGCCTCCT GCCGCAAACT CGCCGGTCAA TAA
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Protein sequence | MTQNMLPHLA SRILGTPLMV DRARLETILS VIGPRVGLEP TAMPSGFEPK DHSSDLMVTP NGIAIVPIHG TLVKRVGAVE AASGLMSYAS IEEKLLDAAT DPAVRAILMD IDSPGGEVGG VFDLAAMIQE AGQGKPIWAL ADDAFSAAYL IASQAHRIIV PQTAGVGSIG VIAAHVDESE KDAKEGRSYT TVFAGAHKND FSSHAPLSDA ARFNLQQEVD RLYGMFTGMV ASGRNISETA VRATEAGLFF GDNAVKAGLA DHVGTIRDAL AGLTTLIESP KRTFMHKLEA TMPTDDTPVL DLPMATTTPP KPPSNVVDLD QVRAEHGKQM RSEAQAIVDL CALAGMPHLA GGYIAEGTAA EAVRKELLAK RADAEEIHSE VMPGDGTRMQ PRQSLETNPV VASCRKLAGQ
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