Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2640 |
Symbol | |
ID | 4480786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3337368 |
End bp | 3338975 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639723384 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_866542 |
Protein GI | 117925925 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC TCAGTGCTAT TGAAATTCAG GACCCTGCAT GGATTGCGAT CGCTTTTATA TTCGGTCTGA TTTTCAAACA ATTTCAACTT GCCCCCATGA TTGGATTTTT GGCGGCTGGC TTTATGCTGA ATATGCTGGG CGTCTCCACA GATTCCTTTT TAAATGAATT AGCAGATCTT GGCGTGACAC TTCTGCTCTT CACTATTGGC CTGAAGCTTC AACTGAAGAC CCTAGCTCGT TTGGAAACTT GGGGTACAGC TACAGCGCAT ATGGCCATAA GTGTGGTTGC CATTACAGCG GTTTTGTTGC TGTTAAGTTT AACGGCTATC CAGGTGTTTG CAGAATTGGA TTTAGCCTCC GCCCTAATCG TTGCCTTTGC GCTCTCTTTT TCCAGCACAG TATTTGCAGT CAAGGTCCTA GAAGAACGTG GTGCAATGAG TTCCCAATAT GGTCGAACGG CCATTGGCAT TCTAGTCATT CAAGATATCG CAGCTGTGAT CTTTTTGGCT GCTTCTTCAG GTAAGCTCCC CTCCATTTGG GCTATCCTTT TATTGGCATT AATTCCGGGG CGCCACCTTC TAGGTTATAT ACTGAGTCGT TCTGGTCATC GCGAGCTTTT ACCTTTGTTT GGGTTTGTTG CGGCCTTAGG CGGAGCCGCA TTGTTTGAAG TAGTGGGCAT GAAAGGGGAT CTTGGTGCGC TGATTTTTGG TGTCCTTTTA GCAAACCATC CCCGTTCTGG AGAGTTGGCA AAGCACTTGT TGGGCTTTAA AGACGTCTTA TTGGTTGGGT TCTTTCTTAC GATCGGATTG GCAGGATTAC CGACTTGGGA CACAGCTCTA GCCGCACTTC TGCTCTCCTT GCTCCTACCT TTCAAAGGTG GACTGTTCTA TCTCCTTCTT GCACGTTTTA AACTCCGGGC TCGAGCTGCA ACCCAGGGTG GGGCGATACT AACGAACTAC TCAGAGTTTG GTCTGATCGT CGCCGCGATC TCCTTGAATG TCGAGTGGTT GCCTGCAGAA TGGATCACCA TTTTGGCGTT AGCGCTCTCT TTTTCATTCC TTCTGGCCTC TCCTCTTAAC CGGTACACAG ACACACTCTA TATGAGTCTT CATGACTGGC TTATACGTTG GGAGCAGGAA AAACGCCTGC CTGAAGATGA AGAGATCTCT ATTTCAGGCA ATCGTATCTT GATCATTGGT ATGGGGCGTG TGGGGCAAGC AGCTTATGAT GAGATGGCTC ACAATGCTGA AGGGCAAATT TTAGGAATTG ATCTTGACAA GGCTGAGGTA GAAAAGAACA GCAAAGAAGG CAGAAGAGTT GTACCTGGAG ATGCGACTCA TCCTGAGTTC TGGTCACGGT TTAGTGATGG CCACAAAGGG GTGGAAATGA TATTGCTCGC AATGCCCAAT CATCTTGGTA ACATTGCCGC TGCTGATAAC CTACGTGCCC ATGGCTACAA GCACTCTCTG GTTGCGACTG CTCTCTATCC AGACCAGGAA GCCGAATTGA AAAGACATGG AATAACAGAA GTCTATAATA TTTATAAAGA AGTTGGTGTG GGAGCTGCGG CACACATGTG GGATTCGATA AAACGGGTTA AAATATGA
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Protein sequence | MDILSAIEIQ DPAWIAIAFI FGLIFKQFQL APMIGFLAAG FMLNMLGVST DSFLNELADL GVTLLLFTIG LKLQLKTLAR LETWGTATAH MAISVVAITA VLLLLSLTAI QVFAELDLAS ALIVAFALSF SSTVFAVKVL EERGAMSSQY GRTAIGILVI QDIAAVIFLA ASSGKLPSIW AILLLALIPG RHLLGYILSR SGHRELLPLF GFVAALGGAA LFEVVGMKGD LGALIFGVLL ANHPRSGELA KHLLGFKDVL LVGFFLTIGL AGLPTWDTAL AALLLSLLLP FKGGLFYLLL ARFKLRARAA TQGGAILTNY SEFGLIVAAI SLNVEWLPAE WITILALALS FSFLLASPLN RYTDTLYMSL HDWLIRWEQE KRLPEDEEIS ISGNRILIIG MGRVGQAAYD EMAHNAEGQI LGIDLDKAEV EKNSKEGRRV VPGDATHPEF WSRFSDGHKG VEMILLAMPN HLGNIAAADN LRAHGYKHSL VATALYPDQE AELKRHGITE VYNIYKEVGV GAAAHMWDSI KRVKI
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