Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2202 |
Symbol | |
ID | 4482269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2808131 |
End bp | 2808925 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639722947 |
Product | SapC family protein |
Protein accession | YP_866109 |
Protein GI | 117925492 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.504396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.230762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAGT CGATGGTTCC CGTTAATCGG GAGCGGCACG GTCACAAAAA GGTGCGCGCT GATAACAATT TTAGCTTTGC ATCCCATTTT CATTTGGCCT ACCTCACCAT GCACGAATTT GCACGGGCCG CGTCGATCTA CCCGGTGGTT TTTTTGGAAG AGAGCCAAAA CGACACCTTT CGCCCCGTTG CACTGCTTGG GCTAGAAGCG GGTGAAAACC TGTTTGTGAG TGCTCAAGGA GAGTGGCTGG CCAGCTATAT TCCTGCCATC ATCCGCCGTT ATCCCTTTGC ATTAACCAAA GCTGGCGATG ACCGTTATGT GGTCTGTTTG GATGAAGCGA GCAGCATGAT CAATGATGAC GAGGGTTTGC CGCTGTTTGA TGAGCAGGGC GAGCCAACGC AAGTGATCGA GAATGTGCGT AAATATTTGG GCGAATTACA GCAGATGGAC CAGATGACAC AGGCATTTAC CCAGTTTTTA CAGGCCAATA ATCTGCTAAC GCCGCTCAAT ATGCGGGTCA ATGGTAGTTC GGGTGTGCGT AATATTTCAG GTTGTTACGT CATCAATGAA GAGCGGATGA ATAAGTTTAG CAATGAAAAA TTTTTAGAAG TGCGTGAAAA GGGCTTTTTG CCGGCCATCT ACGCGCAGTT GATCTCGCTG TCACAAATCG AGCGTTTGGC CAGCATGCAA AAAGAGGGTG CTGCGCTGAA TGTGGAGAGA GAGCCCTTGG GTCAGGTTGT GGCTGCGGCA AAAAGCGCCA AAAGTACCAA AAACAGTTCC AAAAATCTTC AGTAG
|
Protein sequence | MFESMVPVNR ERHGHKKVRA DNNFSFASHF HLAYLTMHEF ARAASIYPVV FLEESQNDTF RPVALLGLEA GENLFVSAQG EWLASYIPAI IRRYPFALTK AGDDRYVVCL DEASSMINDD EGLPLFDEQG EPTQVIENVR KYLGELQQMD QMTQAFTQFL QANNLLTPLN MRVNGSSGVR NISGCYVINE ERMNKFSNEK FLEVREKGFL PAIYAQLISL SQIERLASMQ KEGAALNVER EPLGQVVAAA KSAKSTKNSS KNLQ
|
| |