| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2175 |
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| Symbol | secA |
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| ID | 4483008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2680780 |
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| End bp | 2682756 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722919 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_866082 |
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| Protein GI | 117925465 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.407443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.276741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATC TCTCCCTCCA TGGCGATCCC TATCCGCAAC AGCCGGGCCA TTTGCAACTA
AGCTGGTTGG ACCGCATGGG TGAGCGGGTA CGGTTGGCGT GGATGCGTCA CAAGCAGGTC
AATGGTTGGG TGTTGGGGCG CATGGCGAAA CGGGTGCTCA AGGCGCAGAC AGAGCGGGAG
TCTATGACCC CTGAGGCGTT GCGCGAGGAT CTGCAACGGC TCACCCTCGC GCTGCGTAGG
GATGGCTTGG AAGATGCCTT GGTGGAGCAG GCTTTTGCCC ATGTGCGGTT GACGGCGCAA
CGGGTGTTGG GCATGGCGCA CTTTCCTGTC CAGCTTAAGG GCGGCTACAT CATGCTCATG
GGCTATCTGG CCGAGATGGA TACCGGGGAG GGTAAAACCT TAACCGCGAC ACTGCCCGCC
GCGACGGCGG CCTTGGCGGG CTTTACGGTG CATGTGGTGA CGGTCAATGA GTATCTGGCC
CGGCGGGATG CCCAGTTGAT GACCCCCCTT TATCGCGCTT TGGGAGTGAC CACCGGGGTG
GTGACTGAGA GCATGGATAG CGATGAAAAG CAGCTGGGCT ATCGAGCCAA TGTGGTCTAC
TGCACCAGCA AGACCCTGGT GTTTGACTAT TTGCGGGACC GTATTCAACT GGGCGAGCGT
ATGAAACCCA TGGCCATGGC CTTTGATGCC CTGGTGGGGG GTGGGCGGGG GCAGGTTATG
CTGCAAGGTT TGCAGTATGC CATTGTGGAT GAGGCCGACT CTATCTTTGT GGATGAAGCC
CGCACCCCCT TGATTATTTC AGCCCCCAGT AAGGATGCCA GTGAACTGGC GTTTTTGCAC
ACCGCATGGT CACTTTCGCA GCAGTTGCAG CAGGGGCAGG ACTATACTTT GTCGGGGGAG
GAACCGCCCC GTATCACCGA GGCAGGTTCG GCGCAACTGG CCCAGTTGTG CGTGGATTTG
CCACCGGTGT GGCAGGGACA GCACCGACGG GAAGAGGCGG TGGCACAAGC CTTGACGGCC
CAACACAGCT TTGACCGGGA TGTGCATTAT ATCATCCGCG ATGATAAGGT GATGGTGGTG
GATGAAACCA CGGGCCGGGT GATGCCCGAC CGCGCCTGGG AGCGGGGCTT GCAGCAGTTG
ATTGAAATTA AGGAGGGGGT GGCTGTTACC CCCCCTAAAG AGACCTTGGC GAAGATAAGC
TTTCAGCTCT TTTTTCGGCG GTTTTTGCGG CTCTCGGGTA TGAGTGGCAC CTGCCGCGAG
GTGGGGGGGG AGATTGCCGA GGTCTACGGA TTAGGGGTGG TGCGGGTGGC GCCCAACCGA
CCCAGTAAGC GAAAAAATCT GCCCATAGCG CTCTATGCGT GGCGAGCTCA GGCCGATGCG
GCGGTGGTGC AGGCGGTGCG GCGCTGTCAC ATGCTTGGGC AGCCGGTATT GGTGGGAACC
CGTTCCATTG CGGCGTCTGA GCTGTTGAGT CAAAGCTTTA GCGAGGCTGG TTTGCCGCAC
CGGGTGCTCA ATGCCAAACA GGATCAAGAG GAAAATACCA TTATTGCCGA GGCAGGCTAT
AAAGGTGGCA TTACCATTGC GACCAACATG GCGGGTCGGG GCACCGATAT TAAGCTTTCC
AAAGAGGTTC AGGCGTGTGG TGGCTTGCAT GTGATCTTGA CCGAGCGTCA TGATAACCGC
CGGGTGGACC GCCAATTGGC TGGCCGCTGT GCCCGGCAGG GGGATCCGGG TAGTTGGCAG
GAGATTCTCT CTTTAGAGGA TGAACTAACC CAGAAGTTTC TACCCCTGTT GGGTCGCACG
CTTAGGGCAT GGTTGGCGCT TATGCCCCAC TTTTTTTTGG CGCGTTGGTT GGGTATGGTG
TACTACCGGT GGGCGCAATC CTATGCAGAC CGGGGCCATC GGCGGGTGCG TCGTCAGCTC
ATGAAGACCG ATTTTCAACT GAGGCAGTCG CTCTCCTTTA CCGGGGAGAT GGAGTAG
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| Protein sequence | MFNLSLHGDP YPQQPGHLQL SWLDRMGERV RLAWMRHKQV NGWVLGRMAK RVLKAQTERE
SMTPEALRED LQRLTLALRR DGLEDALVEQ AFAHVRLTAQ RVLGMAHFPV QLKGGYIMLM
GYLAEMDTGE GKTLTATLPA ATAALAGFTV HVVTVNEYLA RRDAQLMTPL YRALGVTTGV
VTESMDSDEK QLGYRANVVY CTSKTLVFDY LRDRIQLGER MKPMAMAFDA LVGGGRGQVM
LQGLQYAIVD EADSIFVDEA RTPLIISAPS KDASELAFLH TAWSLSQQLQ QGQDYTLSGE
EPPRITEAGS AQLAQLCVDL PPVWQGQHRR EEAVAQALTA QHSFDRDVHY IIRDDKVMVV
DETTGRVMPD RAWERGLQQL IEIKEGVAVT PPKETLAKIS FQLFFRRFLR LSGMSGTCRE
VGGEIAEVYG LGVVRVAPNR PSKRKNLPIA LYAWRAQADA AVVQAVRRCH MLGQPVLVGT
RSIAASELLS QSFSEAGLPH RVLNAKQDQE ENTIIAEAGY KGGITIATNM AGRGTDIKLS
KEVQACGGLH VILTERHDNR RVDRQLAGRC ARQGDPGSWQ EILSLEDELT QKFLPLLGRT
LRAWLALMPH FFLARWLGMV YYRWAQSYAD RGHRRVRRQL MKTDFQLRQS LSFTGEME
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