Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2046 |
Symbol | |
ID | 4481780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2528045 |
End bp | 2529346 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639722789 |
Product | serine peptidase |
Protein accession | YP_865953 |
Protein GI | 117925336 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.075058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATC TATCCCATAT GGCATCCCGA ATCCTCGGGA CGCCGCTTAT GGTCGATCGC GCCCGCTTGG AGACTATTCT CTCGGTCATT GGTCCCCGCG TCGGCTTGGA GCCAACGGCC ATGCCCAGCG GCTTTGAGCC CAAAGACCAT AGCTCTGATT TGATGGTCAC GCCTAATGGA ATCGCCATCG TGCCCATCCA CGGCACCCTG GTGAAACGGG TGGGGGCCGT CGAGGCTGCT TCGGGGCTCA TGTCCTACGC ATCCATTGAA GAAAAACTGC TGGATGCCGC CACCGACCCA GCCGTGCGAG CAATCCTAAT GGATATCGAC TCCCCTGGTG GTGAGGTGGG CGGGGTGTTT GATCTGGCTG CCATGATCCA TGAGGCGGGG CAGGGCAAGC CCATCTGGGC CCTAGCCGAT GATGCCTTTT CCGCTGCCTA TCTCATCGCC TCCCAGGCTC ATCGCATTAT TGTGCCCCAA ACTGCGGGGG TGGGCTCCAT CGGCGTCATA GCTGCTCATG TGGATGAGTC GGAGAAGGAT GCCAAAGAGG GGCGTAGCTA CACCACGGTG TTTGCCGGAG CCCGGAAAAA TGACTTTTCC ACCCACGCCC CTCTCTCTCT AGAGGCCCGG ACTAACCTGC AACTGGAGGT AGATCGGCTC TACGGTATGT TCGTCGCCGC CGTGGCAGCA GGTCGCAAGA TGCATGAATC GGCGGTGCGT GCCACCGAGG CAGGCCTGTT CTTTGGCGAC AAGGCAATCC GGGTTGGTCT GGCTGACCAG GTTGGCACCA TCCGGGATGC CCTGGCTGGC CTGTCAATAA CTATTGATGC GTCCAAAAAG ACCCATTCTC ACCGAGCGGC ACTGCCGCGG GAACCTGTGT ATATGGAGGA AACCATGCCC ATGGAAGAAA ATCCGGCGGC TGAAACATCT GTTGTCACGT CACGACAATC CCAACCTGAC CTTCACGCCA AATCCGACAT AATGTCGGAT TTGACTGACC AATCTGCGGT ATCCAACGTT GTGGACCTAG ACAAGGTCCG TGCCGAGCAT GGCCAACAGA TGCGCAATGA GGCTCAGGCT ATTGTTGATC TCTGTGCCCT GGCGGGCATG CCTCACTTGG CAGGCGGCTA TATCGCCGAA GGTACTGCTG CTGAGGCGGT ACGCAAAGAG CTATTGGCCA AGCGGGCCGA TGCTGAGGAG ATCCACTCCG AGGTGATGCC TGGAGATGGC ACCCGTATGC AGCCCAGACA GAGTCTTGAA ACCAACCCGG TGGTGGCCTC CTGCCGCAAA CTCGCCGGTT AA
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Protein sequence | MTNLSHMASR ILGTPLMVDR ARLETILSVI GPRVGLEPTA MPSGFEPKDH SSDLMVTPNG IAIVPIHGTL VKRVGAVEAA SGLMSYASIE EKLLDAATDP AVRAILMDID SPGGEVGGVF DLAAMIHEAG QGKPIWALAD DAFSAAYLIA SQAHRIIVPQ TAGVGSIGVI AAHVDESEKD AKEGRSYTTV FAGARKNDFS THAPLSLEAR TNLQLEVDRL YGMFVAAVAA GRKMHESAVR ATEAGLFFGD KAIRVGLADQ VGTIRDALAG LSITIDASKK THSHRAALPR EPVYMEETMP MEENPAAETS VVTSRQSQPD LHAKSDIMSD LTDQSAVSNV VDLDKVRAEH GQQMRNEAQA IVDLCALAGM PHLAGGYIAE GTAAEAVRKE LLAKRADAEE IHSEVMPGDG TRMQPRQSLE TNPVVASCRK LAG
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