| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2013 |
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| Symbol | |
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| ID | 4483334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2491955 |
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| End bp | 2493781 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639722756 |
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| Product | zinc finger SWIM domain-containing protein |
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| Protein accession | YP_865920 |
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| Protein GI | 117925303 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4715] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.450022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGT TTTCAACCTC AATCTTTCCC TGGAAGACTC TGATGGCACG GAAAAAGAGC
AACCCCGATG CACTGGAAAA GGCCCTGACC ACCGCCACCA TAATGGAGCT GGCAGGCAAC
CGCTACTACT GGCGTGGGAA TGAATACTTC CAGGACGGGG CCGTCACCAG TCTGAAAGAG
AGCGACGGGA TCATCACCGG CAAGGTGCAG GGCACGCGGG CCTACAAGGT CCAGCTCTGG
GTTGAGGAAG ACGAGCTTGA ACACAACTGC TCCTGCCCCT TGGGGGAGGA TTGCGAGTTC
TGCAAACACT GCGTAGCCGT CGGACTTGCT TGGCTGGCGA GGGATCAGAA GGCCCCATTG
GCGGAGGCCG GCAAAAAGGC CAGCGACAGC ATCGGCGAGA AGGACGTCCG GGATTTCCTC
ATGGGCAAGA GCAAAGAGGC CCTGGTGGAG ATGCTCTTGG AGCAGTGCGA GGAGGACGAC
CGGCTCAACC GCCGCCTGTT GGCCATGACC GCCAAGACCA GCCGGGACAA GTTGGACCTC
TCGGTCTGGA AGGACGCCAT CGAAGAGGCG GCATGGTCGG ATGATTTCGT CGACTGGCGG
CACATGCCCG ACTACTCCAG CGGCATCGGC GAGGTGGTCG AATCCATCGA GGAGCTGCTC
CACGAAGGCC ATGCCGAGGC GGTGATCGAA ATCACGGAAC ACGGCCTCAG CGTCATGGAG
CGCGCCGTGG AACAGGTGGA TGACTCCGGC GGCGACATGG GCATGCTCAT GAAGCAGTTG
CAGGATCTCC ACCTCAAAGC TTGCCGCAAG GCCAAACCTG AACCCGCCTC GTTGGCGGAG
CGGCTGTTTG CCTGGGAGTT GGGCAACGAC TGGGGCACCT TTTCCCATGC CGTCGAAACC
TACGCCGACG TGCTGGGGGA TGCCGGCCTG ACCCGGTATC GAAAGTTGAC CGAAGAGGCC
TGGGCCAAGG TGAAGGCGTT GGAATCTAGG GAGCAGGATG CCAGACGCTA CGACAGCAAA
CGGTACCGCA TCACCTCCAT GATGGAGTCC CTGGCCAAGG CATCCGGCAA CCTGGAAGAG
CTGGTGGCCA TCAAGTCGAA GAACCTGTCC CGCCAGTTTC ACTTTTTGGA GATTGCCGAG
ATCTACCAGA AGGATGGCCA GGACGACACC GCCCTGGAGT GGGCCGAACG GGGCTGGAAG
GCCTTTCCGG AAAAAGGTGG TGATGCCAGG CTTCGGGAGT TCATCGCCCA CGCCTACCAT
CGGCGCGACC GGCATGACGA TGCCATGGCC ATGACCTGGA CCGCTTTCAC CGAGCGCACA
TCCTTTGATA TGGTCAAGAC TCTGGCTGAG CACGCCAAAC TGGCCAAGGC GTGGCCGGAA
TGGCGGGAGA AGGCGCTGGC TCATATCCGG GAGCAGATCG CCGCATCAAA ACAGCAGCAG
ACCGGTCGGC GGCGGTGGGA CTACGACTCC CTGAACGACC ACTCCATCCT GGTGCAGGTG
TTCCTGTGGG AGAAGGAGAT GGACGCCGCC TGGAATGAGG CCCGGGAGGG CGGATGCTCG
GGGCCGCTTT GGCTGGAACT GGCCGGCCTG CGAGAGAAGA CGGACCCTTA CAACTCGGTG
CAGATCTACC GAGAGCACAT CCGGATCCTC CTGAAACACG CCGACAAGCG CTACTATGAG
GGGGCGGTGG AGTACCTTGC CAAGATCAAG AAGCTCCTCG GGGCCATAGG CAAGGCAGAG
GAGTTTCCGG CCATCGTGGC CGATGTGCGC AACGAGCACC GGCGCAAGCG CAACCTCATG
GCGCTGCTGG ACCGGAAGAA GTGGTGA
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| Protein sequence | MDAFSTSIFP WKTLMARKKS NPDALEKALT TATIMELAGN RYYWRGNEYF QDGAVTSLKE
SDGIITGKVQ GTRAYKVQLW VEEDELEHNC SCPLGEDCEF CKHCVAVGLA WLARDQKAPL
AEAGKKASDS IGEKDVRDFL MGKSKEALVE MLLEQCEEDD RLNRRLLAMT AKTSRDKLDL
SVWKDAIEEA AWSDDFVDWR HMPDYSSGIG EVVESIEELL HEGHAEAVIE ITEHGLSVME
RAVEQVDDSG GDMGMLMKQL QDLHLKACRK AKPEPASLAE RLFAWELGND WGTFSHAVET
YADVLGDAGL TRYRKLTEEA WAKVKALESR EQDARRYDSK RYRITSMMES LAKASGNLEE
LVAIKSKNLS RQFHFLEIAE IYQKDGQDDT ALEWAERGWK AFPEKGGDAR LREFIAHAYH
RRDRHDDAMA MTWTAFTERT SFDMVKTLAE HAKLAKAWPE WREKALAHIR EQIAASKQQQ
TGRRRWDYDS LNDHSILVQV FLWEKEMDAA WNEAREGGCS GPLWLELAGL REKTDPYNSV
QIYREHIRIL LKHADKRYYE GAVEYLAKIK KLLGAIGKAE EFPAIVADVR NEHRRKRNLM
ALLDRKKW
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