Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1936 |
Symbol | |
ID | 4480448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2410757 |
End bp | 2411605 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722683 |
Product | endonuclease IV |
Protein accession | YP_865850 |
Protein GI | 117925233 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.904759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATG TCGGTGCGCA TGTTAGCATC TCTGGCGGGG TGGAAAATGC CCCCCAAAAC GCGCAGGCAA TAGGGGCCAA AGCGTTTGCA CTGTTTACCA AAAACCAGCG GCAATGGACA GCCAAGCCCA TAACCGATGC GCAAATTGAG CTGTTTAAAC GACGCATGGA CGAATATGGC TTTGTCCCAG AGCAGACTTT ACCTCACGAC TCCTATTTGA TTAATTTGGG CAATCCCGAT GCCGCCAAGC GGCAGCAGTC GCTGGACGCC TTTGTGGATG AGATGCAGCG CTGCGCCCAA TTGGGTCTAC CGTTGCTTAA TTTTCATCCG GGTAGCCATT TGCGCCAAGT GGATGAGGAT CAATGCCTAG ACCTGATTGT GGATAGCTTA AACCGAGCGT TGGAGCGTAC CTCCGGGGTG GTGGCGGTGA TTGAAAATAC GGCGGGGCAG GGCTCAAATT TGGGTTATCG GTTTGAGCAT TTGGCGCATA TTATTGCAGG TGTGGAGGAT AAAAGCCGCA TTGGTGTCTG TTTGGATACC TGTCACACCT TTGTTGCAGG CTATGACCTA CGCACGGCAG AAGCCTACGC TAAAACCATG GATACCTTTG AGCAAGTCGT GGGTTTTAGC TATTTGCGGG GCATGCATCT TAATGATTCA AAACCCGATC TGGGGGCCAA AGTGGATCGG CATCATAGCC TAGGTGCGGG TAAATTGGGG CTGGAGACCT TTCGGTTGAT TATGAATGAT GGCCGCCTGG ATGGCATTCC CCTGATTTTG GAAACCATTG ATGAATCACT CTGGGCGCAG GAGATTGCAC TGCTCTATGC TATGCAAGAA TCCCCTTAA
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Protein sequence | MKYVGAHVSI SGGVENAPQN AQAIGAKAFA LFTKNQRQWT AKPITDAQIE LFKRRMDEYG FVPEQTLPHD SYLINLGNPD AAKRQQSLDA FVDEMQRCAQ LGLPLLNFHP GSHLRQVDED QCLDLIVDSL NRALERTSGV VAVIENTAGQ GSNLGYRFEH LAHIIAGVED KSRIGVCLDT CHTFVAGYDL RTAEAYAKTM DTFEQVVGFS YLRGMHLNDS KPDLGAKVDR HHSLGAGKLG LETFRLIMND GRLDGIPLIL ETIDESLWAQ EIALLYAMQE SP
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