Gene Mmc1_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1925 
Symbol 
ID4483251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2398703 
End bp2399101 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID639722672 
Producthypothetical protein 
Protein accessionYP_865839 
Protein GI117925222 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.946334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTC GCAGGGGTTG GTCACGGCAC CTGATGGTAG CGTTGGGATG GCTGTTTTTT 
GGGCTGGGGG TAGTGGGGGT TTTTTTGCCT GTTATGCCCA CCACCCCTTT TATGGTGTTG
GCCTTATGGG CCTTTGCCAA AGGGGATGGC AAGCTTTACC GGTGGCTTTA TCACCACGTT
TGGTTTGGCC CCCCGCTACA GCGTTGGCAG CGCTGGGGGG TGATTCCCAC GCGGGCTAAA
ATGGCGGCCA TTGGGACGAT GCTGGTGAGT GCGGGTTTCT TGCTCTGGCT ACCGGGTATG
GCCGTTTGGT TAAAGGGGTT GGTGCTGGCA CTTATGTTTG CGGCGATGGT GTTTGTTTGG
AGCCGTCCCA GCGCACCGCC TACCGAACCT TTGTTATAG
 
Protein sequence
MRVRRGWSRH LMVALGWLFF GLGVVGVFLP VMPTTPFMVL ALWAFAKGDG KLYRWLYHHV 
WFGPPLQRWQ RWGVIPTRAK MAAIGTMLVS AGFLLWLPGM AVWLKGLVLA LMFAAMVFVW
SRPSAPPTEP LL