Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1870 |
Symbol | |
ID | 4481142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2326662 |
End bp | 2327294 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722612 |
Product | thymidylate kinase |
Protein accession | YP_865784 |
Protein GI | 117925167 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGTC GTTTTATTAC CTTTGAAGGG GGCGAAGGGG CAGGTAAAAG CACGCAAATT GCGCAGCTAA CCCAAAGCTT GCAAGCGCAT GGGGTGAAGG TGCTCTGCAC CCGCGAACCG GGGGGGTGTC CCATCAGTGA GCGGATACGC GAGATTTTGG TAACAGGGCA GGGGGATGAT CTGGATGGCA CCTCGGAACT CTTATTGATA CTGGCGGCGC GACATGAGCA TATTCGGCAG GTGATTCGCC CCGCTTTGGC CTCGGGACAC TGGGTGCTGT GTGACCGGTT TGAAGACAGC ACCTTGGCTT ACCAGGGGGG TGGGCGTGGG GGGGATGGTC CATGGTTAAG GCAGTTGGGG CAGTGGATAC GGGGGGATGT TTTTCCGGAT TTGACCCTGT TGTTGGATCT TGATCCGACG GTGGGTTTGG CCCGTAGCAA GCGGCGTGGG GGACAAGAGC AGCGCTTTGA GCAGGAGGCT CTCTCGTTTC ATCAACAGGT ACGCCAAGCT TTTTTACAGA TGGCCCAACA GGAGCCGCAA CGCATGATAC CGATTGATGC GGATCAGCCG GTACAGATGG TGGCTGCAAC CATATGGCGT GAAGTCGAGG GGCGTTTCTT TGTCTCGTTT TGA
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Protein sequence | MQGRFITFEG GEGAGKSTQI AQLTQSLQAH GVKVLCTREP GGCPISERIR EILVTGQGDD LDGTSELLLI LAARHEHIRQ VIRPALASGH WVLCDRFEDS TLAYQGGGRG GDGPWLRQLG QWIRGDVFPD LTLLLDLDPT VGLARSKRRG GQEQRFEQEA LSFHQQVRQA FLQMAQQEPQ RMIPIDADQP VQMVAATIWR EVEGRFFVSF
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