Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1867 |
Symbol | |
ID | 4481765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2322525 |
End bp | 2323904 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722609 |
Product | TatD family hydrolase |
Protein accession | YP_865781 |
Protein GI | 117925164 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0084] Mg-dependent DNase [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0284119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTTG CAGATAGCCA CGCTCATTTA AATTTTGATG CCTTCAAAGA GGATCTGCCC AGCGTGCTAC AGCGTGCGCG CCAGCAAGGG GTCCGCTACC TCAACATGAT AGGCACCCGT TTGGATGATG TGGAAGAACT GTTGGCTATG AGCCAGCTTC AGCCCCATCT TTATACCACG GTGGGGGTAC ACCCCCACTA TGCGGATGAG TATGTGACGG CCACACCTGA GCAAATTGCC CAGTTGGCGG ATCATGAAAA AGTGGTGGCC ATTGGAGAGA CCGGTTTAGA TTATCACTAT GATAAGGCCG ACCGCGAGCA CCAAAAGCAG GTGTTTCGCA CGCAGATCCG CGCGGCCCAC ATGGCCAAAC GACCCTTGGT GATTCATACC CGCCAAGCCG AAGCAGATAC CCGCGCCATT ATGGAAGAGG AACAGGCCGC CGCATGTGGT GGTGTTATCC ACTGTTTTAC CGGTACGCAA GAGATGGCCG ATTGGGCTCT GGAACAGGGG TTTTATATTG CGCTATCGGG CATTGTTACC TTTAACTCAG CGCAAGATTT ACAAGAAATT GCGCGGCATA TACCCGCCGA GCGGCTGTTG GTGGAGACCG ATGCCCCCTA TCTCGCGCCA TTGCCCCACC GGGGTGTGCG CAACGAACCC GCATTTGTTG CGCAAACATT GAAAACCATT GCCAAATTTA GGGGGGATAA CGCCAAAGAT TTGGCTGATA TCACCACCGA AAATTATCGC CGCCTGTTTA GGGTGGATCA GGCACGCACC CATGAAAAGG GGGTATTAGC CTATCCCATC GGCAACCGAC TTTATATGAA TGTCACCCAT GGATGTACCC TCAAATGTCA GTTTTGCCCT AAGTGGCAAG CACCAGAGGT ACATGCTTTT AACCTAGCTT TAACGGGTAA TCCAAGCAGT GCAGAGCTTA TCGCGGCGTT TGGTGAACTG GATGCCTTTG ATGAAATTGT GTTTTGTGGC TATGGTGAAC CAACCTTACG ATTGCAGGTG ATGTTAGAGG TTGCCGCTGC GGCCAAACAG CGGGGGAAGC GGGTTCGACT TAATACCGAT GGCTTGGCAA ACTTTGTGTA TGGAGAGGAC ATCGCCCCTA AGATGGCGGG TTTGGTTGAT GCAATCTCCA TTTCACTGAA TGCACAAAAC GCAGAGCTGT ATGACCGCCA CTGTGTGCCG GGTAAAACGG GGGCCTATGC GGGGCTGCTA AGTTTTGTCG ATGCGGTGAA ACCCTATGTG CCAGAAGTCA CCTTAACCGC AATCAGCGGC CTAGAAGGGG TGGATATCCC TGCGTGTGCT GCAATAGCCC GGCAAAAAGG GGTTAAATTT AGGGCCCGAC AGTTGGATCG GGTTGGATAA
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Protein sequence | MYLADSHAHL NFDAFKEDLP SVLQRARQQG VRYLNMIGTR LDDVEELLAM SQLQPHLYTT VGVHPHYADE YVTATPEQIA QLADHEKVVA IGETGLDYHY DKADREHQKQ VFRTQIRAAH MAKRPLVIHT RQAEADTRAI MEEEQAAACG GVIHCFTGTQ EMADWALEQG FYIALSGIVT FNSAQDLQEI ARHIPAERLL VETDAPYLAP LPHRGVRNEP AFVAQTLKTI AKFRGDNAKD LADITTENYR RLFRVDQART HEKGVLAYPI GNRLYMNVTH GCTLKCQFCP KWQAPEVHAF NLALTGNPSS AELIAAFGEL DAFDEIVFCG YGEPTLRLQV MLEVAAAAKQ RGKRVRLNTD GLANFVYGED IAPKMAGLVD AISISLNAQN AELYDRHCVP GKTGAYAGLL SFVDAVKPYV PEVTLTAISG LEGVDIPACA AIARQKGVKF RARQLDRVG
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