Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1756 |
Symbol | |
ID | 4482072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2170357 |
End bp | 2171676 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639722498 |
Product | homoserine dehydrogenase |
Protein accession | YP_865670 |
Protein GI | 117925053 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.145723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCTT TACGCGTAGG CGTTATGGGG TATGGCACGG TTGGGCGTGG CGTAGTGCGT ATGTTGTTGG ATCATGCCGA CCTGCTGGAG GCCCGAACCG GTTGTGCGGT AACCCTACGT TATATTGCCG ACCATAATAC CGAGAGTGAC CGAGGTGTGG TATTGCCAGA GACGGTTACG CTGCTAAACG ATGCCCATAA AATGATCGAG TCCGAGGATG TGGATGTGAT CTGCGAATTG ATCGGCGGCA CCGGTATTGC CAAAACCCTC GTGCTCAAGG CGCTGCAACA GGGTAAACAT GTGGTTACGG CCAACAAGGC GCTCATTGCC ACCCATGGCA ATGAGCTGAT TGCCGCTGCC GATGCCTCGG GCGTAGAGCT GATGTTTGAA GCCTCTACAG CGGGCACCAT CCCCATCATT AAATCCCTGC GTGAGGCGCT GGCGGGTAAT GAGATCCGGG AGATTTATGG CATTCTTAAT GGCACCTGTA ATTACATTCT TACCGAGATG CGCGAGAAGG GGTTGCCCTT TGAGACGGTG TTGGCCGATG CCCAGCAAAA GGGTTATGCC GAGGCTGACC CTACCTTTGA TGTCGACGGT ATTGATGCCG CCCATAAGCT GACCATTTTA GCCTCCATCG CATTTGGTAT GCCGCTCTCT TTTGATGCGG TTTCGGTGGA AGGCATTCGG CATGTCTCTG CGGTGGATAT TGCTTGGGCC ACGGAGATGG GCTATCGCAT TAAACTGCTG GGCATTGCCA AGCGTTGCGA TGGTAAGGTG CAGCTACGTG TGCAGCCGGT GTTGGTTGAA GAGGAGAGCA TGCTGGGCGC CGTAGAAGGG GTATTTAATG CGGTGTTTGT CAACAGCGAC TTTGCTGGTT CTACCATGTA TTATGGGCGT GGCGCTGGCG AGGAGCCTAC TGCCAGCGCG GTGGTTTCTG ATCTCATTGA TATTGCTCGC AATGTGCAAG CAGGGGCGAA GATGCCGCGC ATTTATCCCC TCGGTCAGCC TACGGCCCAG CTTAGCATGC CCACCATGTG CCCGGTAGAA GAGATGCGGG ATGCCTACTA TCTGCGTCTG TCGGTATTGG ATAGACCCGG TGTGTTGGCT GATATTACCG CGATCTTAAA AGAGCACCGG GTCTCCATTG ATGCCATTGT GCAGAAGGAG CGCTCGCCGG TGGAGCATGT GCCTTTGGTG ATTGTGACCC ATGAGGTGAC AGAGCGGCAG ATTTTGGATA CCGTGGCGGC CATTGAAAAG ATGGATTCGG TCAGTGATAA ACCCCGCATG ATCCGCATTG AGGATCTTGG AGTGGCCTAG
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Protein sequence | MKALRVGVMG YGTVGRGVVR MLLDHADLLE ARTGCAVTLR YIADHNTESD RGVVLPETVT LLNDAHKMIE SEDVDVICEL IGGTGIAKTL VLKALQQGKH VVTANKALIA THGNELIAAA DASGVELMFE ASTAGTIPII KSLREALAGN EIREIYGILN GTCNYILTEM REKGLPFETV LADAQQKGYA EADPTFDVDG IDAAHKLTIL ASIAFGMPLS FDAVSVEGIR HVSAVDIAWA TEMGYRIKLL GIAKRCDGKV QLRVQPVLVE EESMLGAVEG VFNAVFVNSD FAGSTMYYGR GAGEEPTASA VVSDLIDIAR NVQAGAKMPR IYPLGQPTAQ LSMPTMCPVE EMRDAYYLRL SVLDRPGVLA DITAILKEHR VSIDAIVQKE RSPVEHVPLV IVTHEVTERQ ILDTVAAIEK MDSVSDKPRM IRIEDLGVA
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