Gene Mmc1_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1623 
Symbol 
ID4480884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2009123 
End bp2010301 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content56% 
IMG OID639722365 
Producthypothetical protein 
Protein accessionYP_865538 
Protein GI117924921 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC CCCTGATCGC GGGAGGCGCT CTTTTATTGG CCTTTTTGGT GGGGAGCAAC 
ATGCCCGTTT CGGTTAAGAC CCATGAGATT GTGGAGCTGC ACAGCCGCAA CACCCTCACT
CAAGGGGCTT TGGTGGAACA GCTTAGCCAG CAGCGGGTGG TGTTAGTGGG GGAGCAGCAT
GATGATCCCC ACCAACATGG GGTACAATTA CAGGTGATTC AGGCTCTGCA CCAAAAGCAT
GGTTTGGTGG CGGTGGGCAT GGAGCAGTTT CCCCGTCATT TACAGCCGGT CTTAGACCGC
TGGAGTGCGG GCGCGTTAAG CGAAGAAGCC TTTTTGGATG AAACCGAATG GTACTTTACC
TGGGGCATGG AGCCTGAGCT GTATCTGCCC ATTTTGCGTT ATGTGCGGGA CCACCATTTG
CCGTTGTTGG CGCTTAATGT CAAGCGCAGC ATCATTGCCG AGATACGGGA AAAAGGGTTG
GACAAGCTTG ACCCTACCCA ACGCCAGCAG CTTCCCACAC CAGCCCCCCC GGCCCAAGCT
TATCGTCACT ATTTGCAGGA TATTTTAGCG GCCCACCATC CACAAATGCC CCTAAAGGGT
TCGGCAGAAA GCTTTATCCA AGCGCAAACC ACCTGGGATA CCGTTATGGC CCAGGGGCTT
TATGATTGGG CACAACGTCA TCCCAACGGC ATCGCCATTG GTTTGGCTGG CACCGGGCAC
ATCGAATTTG GTTATGGTAT ACCCCACCAA CTCAAGGCGC TGGGCCTTAC GCAAATCGCC
ACGGTGATTC CCTGGAGCAG TGGCAGCGAT GGGATAAAAC CAGATAGCGG CGACTACGCT
TGGGGCACAC CCATTATGGA ACGGGTGGAA CAACCCCCGC CGGTCCGTTT GGGTATTTTA
TTAGAGGAGG CCGCCAAGAG CGCCCATGGC CCGGTGGAGA TTGCTCAGGT CATGCCCAAC
AGCATTGCTG AGGGGGCGGG TATGCAGGCA AAGGATCGCA TCATCGCATT AGAGGGCCAA
GCTACCCTGA GCAATCATCA TTTGGTACGC TTGTTACGCC AGCACCATTG GGGCGACACG
CTGACCCTGA CCCTTGTCCG GGATGGCCAG CAACAGAGCT TAACGGTGCA ACTGCCCACG
GACCCTCCCA AGCCAAAACC CCACCACGGT TCCCCTTAA
 
Protein sequence
MAAPLIAGGA LLLAFLVGSN MPVSVKTHEI VELHSRNTLT QGALVEQLSQ QRVVLVGEQH 
DDPHQHGVQL QVIQALHQKH GLVAVGMEQF PRHLQPVLDR WSAGALSEEA FLDETEWYFT
WGMEPELYLP ILRYVRDHHL PLLALNVKRS IIAEIREKGL DKLDPTQRQQ LPTPAPPAQA
YRHYLQDILA AHHPQMPLKG SAESFIQAQT TWDTVMAQGL YDWAQRHPNG IAIGLAGTGH
IEFGYGIPHQ LKALGLTQIA TVIPWSSGSD GIKPDSGDYA WGTPIMERVE QPPPVRLGIL
LEEAAKSAHG PVEIAQVMPN SIAEGAGMQA KDRIIALEGQ ATLSNHHLVR LLRQHHWGDT
LTLTLVRDGQ QQSLTVQLPT DPPKPKPHHG SP