| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1538 |
|---|
| Symbol | |
|---|
| ID | 4483134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1891834 |
|---|
| End bp | 1894848 |
|---|
| Gene Length | 3015 bp |
|---|
| Protein Length | 1004 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639722280 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_865453 |
|---|
| Protein GI | 117924836 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.13069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTC CTACAAAAAA ACAGTTCCCC TTTCATATTG GTATGAGCCT CTATCTTTTG
GCTGTTGTGC TTCTGCTCAC GGTCATGATT TTCTTCATTG TTCACCGGCA GAGCGTTCTT
ACGGCGCAAA AGGATGCGAT CAACCTCTTT CAATCCACAA CAGCGGATAT CACCCACCAA
TTAAAAGGGG TTCTCCGGCC AGCCATGGTG CTCAGCCGTG TGCATGCCAG CGCTCCTTCG
ATCAACGCAC CCCTGGTGGG GGATGGTATG AACCATCCCT TTATGGCACA GTTGATCGAA
TCCCTTCAGG TGGATAAAAA CCTATATGCC GTCTATGTTG GTTTGGCCAA CGGAGACTTT
ATTCAAGCCA TTGCCGCTGT AGAAAACCCA GGCGTCCGAG CCCTCTATGA AGCGCCAGAA
CAGACCGCCG TGATTGCCCG TATCATCCAC GGTACGCCCC GCAAAACCTA CCTGCAATTT
TTGGATCATC AAGGCAAAGT ACTCGAGCAT CGCCAAACGG ATAACCCCAG CTACAACCCG
GTTAGTCGCC CTTGGTATGG CAAGGCGTTG ACCAGCAAAA CTTTTTCGGT GACCGATGCT
TATGTGTTCA ACTCCTCTCC AGAGTTGGGT ATCACCGTCT CTCATGCCCT AAAAGGGGGG
GCGGGCGTGG TTGGGGTTGA CCTGACATTG CGCCAGCTCA ATCGACTTTT GCAAGAAAAA
CAGATTTCCA AACACAGCCA TTTGTTAATT TTTGATCAAC AAAAAAGGGT GTTGGCTTAC
CAGGGATTCA ACGGCCAAAC CCCCATCCAA TCTTTGACCC CAATGGATGC TCTGGGGATA
CCCCAGGTGA CGCTGTTGGA GAATCTTAAC CCAGCGAGAG AACAGGTTGA GGTCCATCCT
TTTAAAGGGG ATCCTTACTT ATTGGTCCAG CACGCCTACA CGCCGATTCC TGAACATACG
CTCAATGTAG CGGTGATCTC ACCGCTTTCC GATTTCACCG GCCATGTACG CAACATGCGT
CAGACCATTT TGGTTTCCGT GCTGCTGCTG ATGCTGGTAT TGGTTCCCTT AATCATATGG
AGTATCCGCA AGCTTAGTAA AGTGTTGGTG CTGCTTGCTG AGGACGCCGA GAGAATCCAG
CGTCTGGATT TTGATGGAAA GTCTCCAGAA GGATCTATGA TTACCGAGGT CAATCAATTA
ACCTCTGGTT TTGCGGCTTT GAAAGAGACC ATCCTCGCAC GTACCGAAGC GATGCAACGC
TCCCAAGCCA AGTTGCAGAA GGTACTTGAT ATCTCCATAT CCCTAGGGGT GGAGAATGAT
CATGAAGTGT TACTTGAAAA GATTTTATTG GGGGGAATTG AGTTAACCCG GGCTGATGCC
GGTACCCTCT ATATGCTCGA AGATGACAAA CTTCACTTTA AAATTTTGCG TACCAACTCC
TTGGGGATGT CCATGGGCGG CAAGAGTGGT CAGCCCGTGA CCCTCCCCCC CATGAATCTT
CATCATCCAG AGACCGGTGA GCCCAACCAC TCCAATGTGG CGACCTATAC GGCACTTACG
GCCAAAACGG TCAATATTGT CGATGCCTAT GACAACACCA CATTTGATTT TTCTGGAACC
CGTAAGTTTG ATGCCGCCAC CGGCTACCGT TCTCAATCGT TTCTCAACGT CCCGCTGGTG
CCACGCGGCG GCAAGGTGTT GGGTGTTTTG CAACTCCTTA ATGCCCAAGA CCCCGTTACA
GGTGCCACTG TGCCCTTTGA GGCAGATACA GTCTCCATCA TTGAGGCACT GTCTGCCCAG
GCTGCGGTAA CATTGGAGAA TAAAACGCTG TTAGAAGCCC AAAAAGCGCT TTTTGACTCC
TTTATCCGCC TTATGGCCGG TGCCATTGAC GCCAAGTCCG CCTATACCGG TGGACATTGT
GAACGGGTAC CCATTTTGGG ACAGCGTTTG GCGGATTTGG CCAACCGCGC AACGGATGGC
CCCTTTGCCG GTTTTACCAT GAACGAAACG CAGGCCGAAG AGATGCGTGT TGCGGCTTGG
TTGCATGATT GTGGAAAGGT AACAACCCCG GAATATGTGG TGGACAAAGC GACCAAACTG
GAAACCACCT ATAACCGTAT CCACGAAGTA CGCATGCGTT TTGAAGTGCT CTACCGAGAT
GCCCAAATTC AGTTTTGGCA GGATGTGGCA CAGGGCAACG GCATGCTCGA TGCGTTGGAA
AAGAGTCTGA AAGAGAAGAA GGCTCAGTTG GATAATGATT TTGAATTTCT TGCTACATCC
AATGTGGGCG GGGAGTATAT GGCCCCTGAA AAACAAGAGC GTATCCGTCA AATTGCGCAA
ATTCCCTGGA TGCGTTATTT TGATGATCGT TTGGGCCTTT CAGAAGCCGA GCTGTTGCGC
GTAAAGGATT TAGAGAAGGT CGCCATACCA GCTCGGGAAT CTTTGCTCTC TGATCGTGCT
GATCATATTC TGCCACGCCT TGATCGGGAT AAAGAGGTGG CAGAGTTGGA GGCACTGGGT
ATTACCATGC CGGTACCCGA GAACCAATAT AACTTTGGGG AGATCTATAA CCTCTGCATT
GCCAAGGGAA CCCTAAGCAA TGAAGAACGT TTCAAGATCA ATGAGCATGT GGTGCAAAGT
ATCCTTATGC TGGAGAAGCT ACCCTTTCCA GAAGGGATGA AAAATGTACC CGAATTTGCC
GGTGCCCATC ACGAAACGAT GATCGGTACA GGCTACCCCC GTGGTTTGAA GAAAGATCAG
ATGTCGGTTC AGGCTCGTAT CATGGCCATC GCGGATGTTT TTGAGGCGCT CACAGCCGCA
GACCGACCCT ACAAAAAGCC CAAAAAAATG AGTGAAGCCA TAAAAATCAT GAGCTTTATG
GTCAAGGACC AGCATATTGA TAAAGAGCTG TTTCAGCTGT TTTTATCAAG TGGCCTCTAT
CACGAATACG GCGAAGAGTA CCTGCTGGAT TTCCAGATGG ATGATGTGGA CATCAGGCCC
TATCTGGATG CATGA
|
|---|
| Protein sequence | MKSPTKKQFP FHIGMSLYLL AVVLLLTVMI FFIVHRQSVL TAQKDAINLF QSTTADITHQ
LKGVLRPAMV LSRVHASAPS INAPLVGDGM NHPFMAQLIE SLQVDKNLYA VYVGLANGDF
IQAIAAVENP GVRALYEAPE QTAVIARIIH GTPRKTYLQF LDHQGKVLEH RQTDNPSYNP
VSRPWYGKAL TSKTFSVTDA YVFNSSPELG ITVSHALKGG AGVVGVDLTL RQLNRLLQEK
QISKHSHLLI FDQQKRVLAY QGFNGQTPIQ SLTPMDALGI PQVTLLENLN PAREQVEVHP
FKGDPYLLVQ HAYTPIPEHT LNVAVISPLS DFTGHVRNMR QTILVSVLLL MLVLVPLIIW
SIRKLSKVLV LLAEDAERIQ RLDFDGKSPE GSMITEVNQL TSGFAALKET ILARTEAMQR
SQAKLQKVLD ISISLGVEND HEVLLEKILL GGIELTRADA GTLYMLEDDK LHFKILRTNS
LGMSMGGKSG QPVTLPPMNL HHPETGEPNH SNVATYTALT AKTVNIVDAY DNTTFDFSGT
RKFDAATGYR SQSFLNVPLV PRGGKVLGVL QLLNAQDPVT GATVPFEADT VSIIEALSAQ
AAVTLENKTL LEAQKALFDS FIRLMAGAID AKSAYTGGHC ERVPILGQRL ADLANRATDG
PFAGFTMNET QAEEMRVAAW LHDCGKVTTP EYVVDKATKL ETTYNRIHEV RMRFEVLYRD
AQIQFWQDVA QGNGMLDALE KSLKEKKAQL DNDFEFLATS NVGGEYMAPE KQERIRQIAQ
IPWMRYFDDR LGLSEAELLR VKDLEKVAIP ARESLLSDRA DHILPRLDRD KEVAELEALG
ITMPVPENQY NFGEIYNLCI AKGTLSNEER FKINEHVVQS ILMLEKLPFP EGMKNVPEFA
GAHHETMIGT GYPRGLKKDQ MSVQARIMAI ADVFEALTAA DRPYKKPKKM SEAIKIMSFM
VKDQHIDKEL FQLFLSSGLY HEYGEEYLLD FQMDDVDIRP YLDA
|
|---|
| |