| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1468 |
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| Symbol | |
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| ID | 4481523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1790943 |
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| End bp | 1792826 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639722209 |
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| Product | ABC transporter related |
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| Protein accession | YP_865383 |
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| Protein GI | 117924766 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.308401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.364804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTA TACTAACGCC CATTGGGCGA TTTTTACATC GGATACGCCA TTTACTGCCC
CACTATCAGC GCTACCGACG CGCCTTTGTA TGGGGCTTTC TGCTGCTTAT TGCCACCAAT
GCCAGTGCCG CGCTGATCCC CTATTTAATG AAGCTTGCCA TCGACACCCT TCAGCGCGGC
GAGGGGATGA CGGATGTCAA AACCTATGCC CTGTTGCTGG CTCTGCTGGC GGTGCTCACG
GCGCTGTTGC GGATACGCGC CCGCACCCAT GTGTTTCGCA TTGGCCGTGA AGTCGAGCGG
GATATGCGCA ACCTCTACCA TGCTCAGTTG CAAGATCTAG AGGCCCCCCT CTTCGACCAT
GCCCGTACCG GTGATCTGGT CTCCCGGGGC ATCGGCGATA TTACGGCCCT GCGCATGTTT
ATGGGTCCGG GTTTTCTACA GCTTACCAAC GCCTCGCTGG TCTATATTTT GGTGCTGCCT
GCCATGCTTT GGCTCAACCC CTGGTTGACC CTTATGGCGC TACTCCCCCT GCCCTTTGTG
GTCATAGCCG CCCGTCAATT GACCAAGCGA CTCTACCGTT ATAGCCGTAT GGTTGCAGAC
CGCTTTGGTG GGTTAACCGC CTTTGTGCAA GAGTCGGTGG CGGGCATGGG GGTTATTCGC
ACCTATGCCC GTGAGGATGC TTGGAACCAA CGCTTTTACG AAGAGACCGA TAAACTTTAT
GCCACCCAAC AGGATCACGC CAGACTGCAA GGCATGTTTC AACCGCTCAT GCTCTTTAGC
GGCGGTTTGG GTGCCTGGAT AATCTTAGCC GTGGGTGGTC CTGGCGTGGT ACAGGGCAAC
TTGACGGTGG GGGATTTTGT GGCCTTTACC GGCTATCTGA CCCTGATGAT TCAACCCACC
GTAGCGCTGG GGTGGATCCT TACCGTCATG CAGCGGGGCT TGGCCGCCAT CGACCGCCTG
AGCGAGGTGC TGGATATCAC CCCCAGCAAC GCCGATCACC CCCAGCAGGC ACTGCACCCA
GAGCCCACCA CCCCCTATGC CATTGAGATC CGCCATCTCA ATTTTTTCTA CCAGCAGGAT
CGACGCATTG CCCCCCGCAG TAAAGAGGCC GCACCCTCCC ACGCGGTGAC CACCGCTGCG
GGGGATGGCA CAGAACCCGC CGCCGTACAG ACCCTGCATG ATATTACCCT AACGGTCCCC
CATGGTCACT TTGTGGGCTT GGCCGGGCGC ATTGGCAGTG GTAAATCCAC CCTACTGCGC
TGCTTGAGCC GCACCTATCC CATTCCACAA GGCAGCCTGT TTTTGGATGG TGTGGATCTG
GCCCATGTAC CCGAAGCCCA ACTGCGCCAA CACCTTACCA TGACCCCGCA GGAGAGCCTG
CTGTTCTCCC GGCCACTGCT GGAAAACCTG CTCTATGGTC AGCCCGACGA AGATGAAGCG
TGCGCCTGGG AAGCTGCCCG CAATGCTGCT TTTGATGAAG AGGTCGAGGG CATGCCCCAA
GGTATGGAGA CCTTAATCGG TGAACGGGGC ATCACCCTTT CGGGCGGCCA GCGCCAGCGG
GCCGCACTGG CCCGCGCCTT GGTGGTTAAC CCGCGCATTT TACTGCTGGA TGATATTTTT
AGTTCGGTGG ATGCCCGTAC TGAAGCACAC ATTCTTAATG CCCTGCTGGA CCGCCCCGAC
CGTCCCACCA TGGTCATGGT GTGTCAGCGG GTAGCCGCCC TGCACCGGGC CGACACCATC
TACCTGATGG ATCAAGGGCG CATCTGCGAA ACAGGCAACC ACCAGTCGCT TATGCAGAGC
AGCAGCCTCT ATCAAGCGTT GCATACGGAG ATGCAACGCA AAGAGCAGTT GGAAGAGATG
GAGCAACCCG AGGTGCAACC ATGA
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| Protein sequence | MNLILTPIGR FLHRIRHLLP HYQRYRRAFV WGFLLLIATN ASAALIPYLM KLAIDTLQRG
EGMTDVKTYA LLLALLAVLT ALLRIRARTH VFRIGREVER DMRNLYHAQL QDLEAPLFDH
ARTGDLVSRG IGDITALRMF MGPGFLQLTN ASLVYILVLP AMLWLNPWLT LMALLPLPFV
VIAARQLTKR LYRYSRMVAD RFGGLTAFVQ ESVAGMGVIR TYAREDAWNQ RFYEETDKLY
ATQQDHARLQ GMFQPLMLFS GGLGAWIILA VGGPGVVQGN LTVGDFVAFT GYLTLMIQPT
VALGWILTVM QRGLAAIDRL SEVLDITPSN ADHPQQALHP EPTTPYAIEI RHLNFFYQQD
RRIAPRSKEA APSHAVTTAA GDGTEPAAVQ TLHDITLTVP HGHFVGLAGR IGSGKSTLLR
CLSRTYPIPQ GSLFLDGVDL AHVPEAQLRQ HLTMTPQESL LFSRPLLENL LYGQPDEDEA
CAWEAARNAA FDEEVEGMPQ GMETLIGERG ITLSGGQRQR AALARALVVN PRILLLDDIF
SSVDARTEAH ILNALLDRPD RPTMVMVCQR VAALHRADTI YLMDQGRICE TGNHQSLMQS
SSLYQALHTE MQRKEQLEEM EQPEVQP
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