| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1353 |
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| Symbol | |
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| ID | 4481825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1636621 |
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| End bp | 1642920 |
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| Gene Length | 6300 bp |
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| Protein Length | 2099 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639722096 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_865270 |
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| Protein GI | 117924653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTT CCGTCCTCAC ACATCAATTG CGCCAAGGGG TCGAAGACTT CCTGGAAACC
ACCTTCCCAA TTGCCACACA GCACTTCCAT GGCCTATTGG GTGATTTACT GACCCGGCCT
GGGGAGGTGT TTAAGGGGCC ATACCTCTCC CTGGGACTGC CCTTCGAGCA GGGGGCGTCA
GGCAAAGACT TCTTCCCTGA CATCCCTATG CCTTTCAATG CCCATCGCCA CCAGGAACAG
GCGTTCCAGC GGCTGTCGGC CTCCCCGCCC CAATCCACCA TCGTCGCGAC GGGAACGGGG
TCGGGCAAGA CCGAATGCTT TCTCTACCCC ATCCTGGATT ATTGCTACCA GCATCGTGGT
GAGCCTGGGG TCAAGGTGAT CCTGATTTAC CCCATGAACG CCCTGGCCTC CGACCAAGCG
GCCCGTATCG CCAAGCTGGT CTTTAACAAC CCGAACCTCA AGGGCCACGT TACCGCTGGC
CTCTTTATCG GCCAGAGCGA ACACGACCCG TGCAAGGTCA TGGGGGCCGA CCACATCATC
ACCGACAAGG AGACCCAGCG CCGCAGCCCG CCCGACATTT TGCTCACCAA CTACAAGATG
CTGGACTACC TGCTGATCCG TCCCAGGGAT CGGGATCTCT GGCAGCACAA CGACGCCGAC
ACCCTGCGCT ATCTGGTCGT GGACGAACTG CACACCTTCG ATGGCGCCCA AGGCACCGAT
CTGGCCTGCC TGATCCGCCG CCTCAAGGCC CGCCTGGGCA CGCCCAAGAA CCACCTCTGC
TGCGTCGGCA CCTCGGCCAC TCTGGGGGAC GCCTCGGGGG CCAAGGCCCT GTTGGACTAC
GCCTCGGAGG TCTTCGGCGA GACCTTCCAG CCAGGGTCGA TCATCACCGA GCAACGCCAG
AAGGCGGGCC AGTTCCTGGA AAACAGCCTG ATCCGTCAGG TCGCCATTCC CTCCAGCGGA
GAGGTCGCCG ACATCGATCC CTCATCACAC CCCAACCATC GGGCCTATGT CGCCAAGCAG
CACGAACTCT GGTTCGGCGA GACCATCGCC GACTTCGACG ATCCCGCGTG GCGCACCGCA
CTGGCCGACC GCCTGCGCGG CCACGTCTTC TTCCAGAACC TATTGAAGGT CTTGAGCGGT
CAGGCGCTGG ATTATGACGA CCTGCTGACC GAATTGGCCC GCATCACCAC CGAACTGCAA
TCGGGGGATC GCGCCTACCG CAGCCACGTT CTGAACAGCC TGCTGACCCT GGTTTCCGAA
GCCAAGAACC CCAATGGCCA GCCGTTTCTC CAGGTGCGCC TGCAATGGTG GATGCGGGAA
TTGCGCCGCA TGGTCGCCAC CGTCGCCGAC GGTACGGACG ATGTCAAACC GCAGCTTCGC
TTCCACGACG ACCTGACCGA CGAGCAACAG AAACGTCACC TGCCCATCGT TCACTGCCGC
GAGTGCGGCA GCGTCGGCTG GTCGGGCCTC AAGGGCAAAA ACAGTGAGAA GGTGGAGACG
GCCCTTAGGG ACTTCTACAT CGGCTTCTTC AACGGCGACC AGCGGGTTAC CTTCCTCTTC
CCCGAGGGTA ACAATGGCGA AGCAGCCACC AGCGCGGGCT ACTACAGCCA CCTCTGCCCC
AACTGCATGA CCATGAACCC CGCGCAACGG AAAGGCGATT GTTCCAACTG CGGCGAGGAC
AAGCTGGTGA CCGTCCTGGT GCCCAACAAC GAGGCCCGCC GCAATGACCG CATCATCTCC
ACCCACCACT GCCCGTATTG CGGCGGTCAC AACAGCCTGA CTCTGGTCGG CTCCCAGGCC
GCGAGCCTCA CCAGCGTGCT CATCGCCCAG CTTTTCGCCT CGTCGTTCAA CGACGACAAA
AAGCTGCTGA CCTTTTCCGA CTCGGTACAG GACGCCGCCC ACCGCGCTGG TTTCTTCGCC
GCCCGCACAT GGAAGTTCAA CTTCCGCACC GCCCTCTGTC AGTTCATTCA GCATGCGGGC
CAGGGCCTCA CCCTGAAGGA GTTGCCCAAC GCATTCATCA AGCACTGGTC GGCCCAGATG
GACGACAAGC AGTTCATCGC CACCTTCATC GCCCCCAACA TGGGCTGGTT CGCCGACTAC
GACGCTTTAC AGAAGAGCGG CAAGCTGCCT GTAGGGTCAC GGCTCAAGCA TGAAGTGGAA
CGGCGCATCG ACTGGGAGGT CACCAGCGAA CTGGCCTTCA GCGCCCGCAT CGGTCGCACG
TTGGAAAAAA CCCTGTCGGC CACGGCGCAC CTAAACCCCG ATCTTCTGGA ACAGGCGATA
CAGGCCCTGC TGGAACCTCT GCAAAACGAG ATCGGGGCCT TGCGGGAACT GGAGGCCGAC
ACCCTGCGCC GTTTCCTCAT GGGCCTCGTG ACCCACCTGC GCCATCAGGG TGCGGTGAGC
CACACGGCGC TGGAGACCTA CATCGAAAAC CAGGGTCGGG AGTACCTGCT GAAGCGCATT
CACTGGATGC CCAATTTCGG CCCCTTCACC CGTGCGCCGA CATTTTTGAC CAGCAGGAAG
ATGGGTCAAC GGTTCGACAT CCCCGTGGCG GCCCAAGGCC ACAAACGTAC TTGGTATCAG
GCCTGGGCTG AACGGATGCT GGGCCAGCAG AATCTATTGG TCAGCAGCGA AATTGACCGT
TTTTACGATA TCCTGCTCAA AGGGCTGGTA GACGCTGGCA TCCTTGATCA GACCGTGGTT
CAGGGCATCA AGGTCTGGGG CATCAAGCCC GAGGCCCTGC TGGTCAGCCA TGAACTCCAG
GAGTTCCTCT GCGAGGCATG CGGCAACACC ACGACCTTCG ATCAGGCCGA GGCGGCAGCC
TGGGACGGCA CGCTCTGCTT GCGCTCCAAC TGCCAGGGGG TCTACCGACC CGTGCCGCCG
CGTCGTGATT ACTACGGCCT GCTGTACGCC AGTGGAGACA TCAAACGCAT CTTCGCCGCC
GAGCATACGG GACTGCTCAA ACGCGACGAC CGCGAGGAGT TGGAACGCCA GTTCAAGGCT
GCCGAAGCAG ACCGCCAACC GTGGCACCCC AACCTGCTCT CATGCACCCC AACCCTGGAG
ATGGGTATTG ACATCGGCGA CCTGTCGTCG GCCATTCTCT GCTCGGTTCC ACCTGCTCAA
GCCAATTACC TGCAACGCAT TGGACGGGCG GGACGGCGAG ACGGAAACGC CCTGAACGTC
ACCATCGCCA ACGGTCGTCC CCACGACCTC TACTTTTTTG CGGATCCGCG TTCCATGCTG
GCAGGCCACG TCGATCCGCC AGGGGTCTTT CTCAACGCCT CGGCGGTGCT GGAGCGCCAG
TTCACAGCCT TCTGTTTCGA CCGCTGGGTG TCCTCGGGCA TCGCGGAAAG CGACTTCCCT
CGTCAACTGC GCAGTGTCCT CGGCAATCTG GATAAAGTCA GCCCCAAGAA GTTTCCGCAC
AACCTGATGC GGTTCATCGA TAACCACCAG ACCAAGTTGC TGGCCACGTT CATGGGTCTG
TTTACTGGGT CGCTGGATGA TGAGTCCAAG GCGCACATCA CCAACTTCGT CCAGGGAGAC
GACGACACCC ACGGCAGCCT GACATGGCGC ATCACCCACG GCCTGCAAGA CCAGCGCAAG
CAACGGGACT CCCTACAGCG CAAGGTCAGA TTGCTCAAAG ACCGCATCAA GAAAAAGGAA
AATGACCCCG CCGCTGGCCA GCACAAGGCC CAGGAACTGG AAGAGCTACA GCGCGAGCGC
AGCGCCCTCC AGGAACTGGT AAAGGCCATC AACGACCGCG ACACCCTCAA CTTCTTCACC
GACGAAGGGC TTTTGCCCAA CTACGCATTC CCCGAGGCTG GCGTCGTCCT CCAGTCCATC
ATCTACCGAC GCAAGCGCGA TCCCCAGGAC GGTGGCGGCA ACTACGACAC ATGGCGCTAT
GAGTACGAAC GGTCGGCCTC CAGCGCCATC GACGAACTGG CCCCCGAGAA CACCTTTTAC
GCCGACGGTC GGAAGGTGAA GATCGACCAA GTGGACATGG GGTCGTCCGA GATCGAAACG
TGGCGCTTCT GCTCCAACTG CTCACACTCG GAGTTGGTGG GGACGGGCCA GGACGCCGCA
ACCTGCCCAA GCTGCGGCAG CACCATGTGG GCCGACGCGG GTCAACTGCG GCGGATGCTC
AGAATGCGGC AGGTCTTCGC CACCTGTTCC GACAAGGACA GCCGCATCGG CGACGACAGC
GACGACCGCA CCCCCTCGTT CTACAACAAG CAGACCCTGG TGGACTTCGA GGATCGCCAT
GTCACCGACG CATGGCGCAT CGCCGACGAC GATCTGCCCT TCGGTTTCGA GTTTTTGAGC
CGCGCATCCT TCCGTGAGAT CAATTTCGGC CTACGGGGTA TGGAGGGCGA CAAGATCACG
ATTGCCGGTC AGGAGTTGCA CCGTAATGGA TTCAAGGTCT GCAAATTCTG CGGCAAGGTC
GATCCGAAAG AGGAACGGGA TCACACCTTT ACCTGCACCG CCCGCGACAA GGCGTCGGAC
AAGAACATCG TGGAGTGCCT GTACCTCTAC CGCGAGTTCG CGTCCGAGGC GATCCGCATG
CTTTTGCCCG TCACCACGTT CTCGGGGTCG GAGGACAAGC TGAACTCGTT TGTCGCGGCA
CTGCAACTGG GACTCAAGCG CATGTTCGGC GGCAGCGTCG GCCACCTGCA AACGGCGGTG
CAGGAAGAGC CTGTTTCGGA TTCGGCGCAC CGAAAACGGT ATCTGGTGCT GTTCGACACG
GTTCCTGGCG GCACGGGCTA CCTCAAGCAA CTCATGCGCT CACCCGAGCC GTTGATGGAC
GTGTTCGCAC TGGCATTGGA TGGCCTCCAG GGATGTGGTT GCAATGACGA CGCGACCAAG
GACGGCTGCT ACCGCTGCCT GTTCGCCTAC CGCAACAGCT ACGACATGGC CGAGACCTCT
CGGGATACCG CTGTCGAACT GCTGAAGGAG ATCCTGGAGC AGCGCGAAAA TCTGATAAAG
ATCGACGGCC TGAAGAGCGT ATCGGTCAAC GCCCTGTTCG ACAGTGAACT GGAGGCTCGT
TTCATCGAGG CCATCAGGCG CATCAAGGTC GAAGAGCAGT CGGCCAAGCT GGTGAAAAAG
ATGCTGCCCG CCAGCGGCAA GCCAGGATAC CTTTTGACAG TTGGCGAACA ACGGTGGGAA
ATCGAGCCGC AGGTCAACCT GGGGCCGCAG CACGGGGTGA CCATACCGTC CAAGGCCGAT
TTCCTGTTCT GGCCCGTGGG ACGCAGTGCC AGGGCCAAAC CTGTTGCGGT CTTCACCGAC
GGCTATCTCT ACCATCGGAA CCGCGTCGGC CTGGACATGG CCCAGCGCAT GGCGATTGTC
CAGTCGGGCA ACTTCCACGT CTGGTCACTC TCGTGGAAGG ACGTGGAGAA CAGGTTCAAA
GGCCAGGGTG ACTATTTTCA GCAACTGTTG GCCCCGAAGA AGGCTCCACT GGTCGGCGAG
TTGAACAACC TCCTGAACCG CTATCAGGTG GAGGGCATGC ACGCGCTCCA CATGGGCGAC
AGCTTTGACT GGCTGGTGCG CTTCTTGGCC AAGCCCGACG CCAGCAAGTG GACGTACTGC
GCATTCGTCC ACGGCCTGAT CCACCTGGAC AAAACCGTGG CACACGGAGA CTGGCAACAG
GGCCTGTCGG ATCTGCCCGA CAACATCGGT TCGTTCGTGG CCCAGAATGC CGAGGCCCGT
GTGCGCGGGC GGTGGAAGTC GGAGAAGTCC CAGGGTCAGG TGGATCTCTG GTTGGCCGTC
GATCCCATGT GCATCAACGA TGGTGAAGCT ACTGGCATGC GGTTGGTCGC CAACCTGCCA
GATTCCGATG CGGCCCGTGA ACAAGAGGGC TTCGAGTCCA TCTGGAACGG GTTCATTCGG
CTCTACAACC TGCTCCAGTT CCTGCCGCAC GCTTTCTGCG TCACCTCCGA CGGGCAGTCG
AAACGGGCCT ACGAAAAGCT GGAGATCAAA GACGCAAAAG TACAGCCTAC AGGCCCAGGG
GAACCAGAGG CCCATGGGTG GTCGGATGAC GTACTCGAAC TGGCCGATGA GTCGCTGCAC
GGCCTGCTGG CCGACCTCGC CAAAACAGGA TGGCCCGAAC CAGAGGTTGG CTATGAACTG
GCCGACGCTT CTGGCGAGAT CGTCGGTGAG GCCGAGGTGG CCTGGGAGAC CGAGCGTATA
GCCATCGTGA TGGACGACGA ATCAAAAGGG GCCTTCACCC AGGCCCAGTG GAAGGTGTTC
ACAGCAGACG AAGTGCTTGG CGACCCGACG TTGCTCGGCA AAGTGAAGGA GGAGGGTTAA
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| Protein sequence | MIPSVLTHQL RQGVEDFLET TFPIATQHFH GLLGDLLTRP GEVFKGPYLS LGLPFEQGAS
GKDFFPDIPM PFNAHRHQEQ AFQRLSASPP QSTIVATGTG SGKTECFLYP ILDYCYQHRG
EPGVKVILIY PMNALASDQA ARIAKLVFNN PNLKGHVTAG LFIGQSEHDP CKVMGADHII
TDKETQRRSP PDILLTNYKM LDYLLIRPRD RDLWQHNDAD TLRYLVVDEL HTFDGAQGTD
LACLIRRLKA RLGTPKNHLC CVGTSATLGD ASGAKALLDY ASEVFGETFQ PGSIITEQRQ
KAGQFLENSL IRQVAIPSSG EVADIDPSSH PNHRAYVAKQ HELWFGETIA DFDDPAWRTA
LADRLRGHVF FQNLLKVLSG QALDYDDLLT ELARITTELQ SGDRAYRSHV LNSLLTLVSE
AKNPNGQPFL QVRLQWWMRE LRRMVATVAD GTDDVKPQLR FHDDLTDEQQ KRHLPIVHCR
ECGSVGWSGL KGKNSEKVET ALRDFYIGFF NGDQRVTFLF PEGNNGEAAT SAGYYSHLCP
NCMTMNPAQR KGDCSNCGED KLVTVLVPNN EARRNDRIIS THHCPYCGGH NSLTLVGSQA
ASLTSVLIAQ LFASSFNDDK KLLTFSDSVQ DAAHRAGFFA ARTWKFNFRT ALCQFIQHAG
QGLTLKELPN AFIKHWSAQM DDKQFIATFI APNMGWFADY DALQKSGKLP VGSRLKHEVE
RRIDWEVTSE LAFSARIGRT LEKTLSATAH LNPDLLEQAI QALLEPLQNE IGALRELEAD
TLRRFLMGLV THLRHQGAVS HTALETYIEN QGREYLLKRI HWMPNFGPFT RAPTFLTSRK
MGQRFDIPVA AQGHKRTWYQ AWAERMLGQQ NLLVSSEIDR FYDILLKGLV DAGILDQTVV
QGIKVWGIKP EALLVSHELQ EFLCEACGNT TTFDQAEAAA WDGTLCLRSN CQGVYRPVPP
RRDYYGLLYA SGDIKRIFAA EHTGLLKRDD REELERQFKA AEADRQPWHP NLLSCTPTLE
MGIDIGDLSS AILCSVPPAQ ANYLQRIGRA GRRDGNALNV TIANGRPHDL YFFADPRSML
AGHVDPPGVF LNASAVLERQ FTAFCFDRWV SSGIAESDFP RQLRSVLGNL DKVSPKKFPH
NLMRFIDNHQ TKLLATFMGL FTGSLDDESK AHITNFVQGD DDTHGSLTWR ITHGLQDQRK
QRDSLQRKVR LLKDRIKKKE NDPAAGQHKA QELEELQRER SALQELVKAI NDRDTLNFFT
DEGLLPNYAF PEAGVVLQSI IYRRKRDPQD GGGNYDTWRY EYERSASSAI DELAPENTFY
ADGRKVKIDQ VDMGSSEIET WRFCSNCSHS ELVGTGQDAA TCPSCGSTMW ADAGQLRRML
RMRQVFATCS DKDSRIGDDS DDRTPSFYNK QTLVDFEDRH VTDAWRIADD DLPFGFEFLS
RASFREINFG LRGMEGDKIT IAGQELHRNG FKVCKFCGKV DPKEERDHTF TCTARDKASD
KNIVECLYLY REFASEAIRM LLPVTTFSGS EDKLNSFVAA LQLGLKRMFG GSVGHLQTAV
QEEPVSDSAH RKRYLVLFDT VPGGTGYLKQ LMRSPEPLMD VFALALDGLQ GCGCNDDATK
DGCYRCLFAY RNSYDMAETS RDTAVELLKE ILEQRENLIK IDGLKSVSVN ALFDSELEAR
FIEAIRRIKV EEQSAKLVKK MLPASGKPGY LLTVGEQRWE IEPQVNLGPQ HGVTIPSKAD
FLFWPVGRSA RAKPVAVFTD GYLYHRNRVG LDMAQRMAIV QSGNFHVWSL SWKDVENRFK
GQGDYFQQLL APKKAPLVGE LNNLLNRYQV EGMHALHMGD SFDWLVRFLA KPDASKWTYC
AFVHGLIHLD KTVAHGDWQQ GLSDLPDNIG SFVAQNAEAR VRGRWKSEKS QGQVDLWLAV
DPMCINDGEA TGMRLVANLP DSDAAREQEG FESIWNGFIR LYNLLQFLPH AFCVTSDGQS
KRAYEKLEIK DAKVQPTGPG EPEAHGWSDD VLELADESLH GLLADLAKTG WPEPEVGYEL
ADASGEIVGE AEVAWETERI AIVMDDESKG AFTQAQWKVF TADEVLGDPT LLGKVKEEG
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