Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1252 |
Symbol | |
ID | 4481847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1547823 |
End bp | 1548500 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721995 |
Product | hypothetical protein |
Protein accession | YP_865169 |
Protein GI | 117924552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0979226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.219751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCC CACTCACCAC TACCCAACGC ACGATCATTG AAGCCGCTGC CCAGCGCACC GACGGATCCA TCAACCCTCT ACCGGAACGC ATTCGGGGAG GAGCGCAAGG CAAGGTGATC AACGCCCTTG AAGCCAAAGG TTTAATCGAG AACGTAAGCA ACAACCCTCC CTACCCCAAC TGGGTCCTTA CCAACGCCGC ATACCAGGCT ATTGGCCAGG AGCCTCCTGC CCCATCTTCT GTTGAAAATC AGACCATCGA TGCCATGGCT GAGGAAACAG ATCCCCCGGA GGACCACAAG GCAGAGATCT TTAGCAAGAT CGCCCTGGAT CACCTTTTCA TCGATACGCT GGAGACCCGC AATGCTGACA GCCTCGACTT CCACAACGTC AGCGTCTGGG GCGTCCAGAG CGCTTTGGAA GCCGCTTATC AAGCTGGTAT TGAAACAGCT CAACGCAAAA CGCCCCGATC CAGAGGGACC AGGGCGAATT CAAAACAGGC CAAAATGATT GAGATGATGC AGCGGCCCGG CGGAGCGACG TTGGAGCAAC TATCTACTGA GACGGGCTGG GGATCCAACA CAATCAGAGG CTCGATTTCT GGCATCCTAA AAAGGAAACT GGGCCTTGAT GTAAACCGTG AAAAGATCGA CGGAGTGAGC ACCTACTTTA TCAAATGA
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Protein sequence | MTIPLTTTQR TIIEAAAQRT DGSINPLPER IRGGAQGKVI NALEAKGLIE NVSNNPPYPN WVLTNAAYQA IGQEPPAPSS VENQTIDAMA EETDPPEDHK AEIFSKIALD HLFIDTLETR NADSLDFHNV SVWGVQSALE AAYQAGIETA QRKTPRSRGT RANSKQAKMI EMMQRPGGAT LEQLSTETGW GSNTIRGSIS GILKRKLGLD VNREKIDGVS TYFIK
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