Gene Mmc1_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0630 
Symbol 
ID4481923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp764724 
End bp766832 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content55% 
IMG OID639721373 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_864557 
Protein GI117923940 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG ATACCAGCGC ATTTACCGAA GAGGCTTATG AACTCCTTTC GGAGCTTGAA 
GACTCGCTGT TAGTGTTGGA AGAAAACCCC CAAGATATGG AGCTCATTGG CCGCGTCTTT
CGCGCCATGC ATACCATTAA GGGCTCGGGT GCCATGTTTG GCTTTGATGA GGTGGCTGAG
TTCACCCACG ATGTGGAAAC GGTTTTCGAT AAAGCCCGTG AAGGGGCTAT CCCCGTCACC
AAAGAGTTGA TTGATTTAAC CCTGGCCGCT CGGGATCAGA TTCGCGCTAT CCTGGATGAA
GCAGGCGGTG GCGCACCCTC GGATAAGCAA AATGCCCAGC GCATCATCTT AGGTCTACGA
GCGCTTATTC CCGGCAATAC CGCCAGAGCC CCACAGCCGG CCAATGAGGA GCCCGAGCCT
ATTGAAGCCT CCTCCGAGAG CGCCGCAGGC AAGCACACCT ACCGTGTGCG CTTTAAACCT
GACGCCAACA TTTTTATGAG TGGCACCAAC CCCCTGCTGC TGATTGAAGA GCTCATAGAG
CTTGGCTCGT GCAAGGTGGT AGGCATCACC GACGCGCTAC CCCCACTAAG CGAGATAAAC
CCCGAGCAGT GCCACACCTC CTGGGAGATC TTTCTCACCA CCGATCAGGG CGAAAGTGCC
ATCCAGGATG TCTTTATCTT TGTTGAAGAT GAGTGCGAAC TCAACATTCG CCGCATCGAC
CGCGATGAGG ATGTGGATGA TCAAGCCCAG ATCAAACGGC TGGGGGATCT GCTGGTTGAA
CGCGGCGATA TTGACAAGCA AACCTTAGAG AGCATCACCG ACCCCCTCGG AGATCGACTG
GTCAAGGCTG GACTGGTCAG CAAAGGCAAG GTGGATGCCG CGCTTATTGA ACAACAGGTG
GTCAAAGAGA AACAGCAAAC CAACAAGGTA CAAGAGCAAG CCGCCAGTGT GCGGGTACCT
TCGGACAAGC TGGATCAATT GGTGGATCTG GTGGGAGAGC TGGTGACGGT GCAAGCCCGC
CTTAACCAGA CGGCCCACAG CCATGGGGAC CACGATCTTC AATTGATCGC CGAAGAGGTT
GAGCGCCTCA CCGCTGAACT GCGTGACAAC ACCATGTCCA TCCGCATGTT AGCCATTGGC
ACCACGTTTA ATAAGTTTAA GCGACTGGTG CGAGATCTCT CTAAAGAGCT GGGCAAACAG
ATTGAGTTAA CCACCGCCGG GGCTGAGACT GAGCTGGATA AAAACGTCAT TGATCAGCTC
AATGATCCGC TGGTTCACAT TATCCGCAAC AGCATTGACC ATGGGGTCGA AAGCCCCCAA
CAGCGTCAGG CGGTGGGCAA ACCTGCTGCG GGTACGGTGC ATCTTTCGGC GGAACATAGC
GGTGCCAATG TGCTGATTCG TATCACCGAC GATGGTGCCG GTCTGGACCC CAAAAAACTA
CGTACCAAAG CGGTGGAAAA GGGACAGCTA CCCGCCGATA ACGAGTTGAC CGATAAAGAG
GCTTACCAGC TTATCTTTGG GGCCGGCTTC TCGACCGCCG CCAAAATCAC CAACGTCTCT
GGGCGTGGGG TGGGTATGGA TGTGGTACGC AAATCCATCG ACAGTCTGCG CGGTTCGGTG
GAGGTCGACA GCACCTTGGG GCAAGGCACC TCCATTACCC TCAAACTTCC GTTGACCTTG
GCCATTATTG AGGGGCTATT GGTCCAGATT CATGATGAGT ACTTTGTGCT GCCGCTGGCC
GCGGTGGAGG AGTGCGTGGA GCTCACCCGC ACCGATGTTG CCAATACCCA TGGCCGCCAA
GTGATCAATG TGCGGGGCCA TATTGTGCCC TACATTCGTC TACGGGATCG TTTTGAGATC
AGTGGGCCGG CACCGGATGT AGAACAGATT GTGATCTCTG AGGTCGAAGG GCAGCAGATG
GGGTTTGTGG TGGATCATGT CATTGGTCAA CACCAGACCG TGATCAAATC CCTGGGCAAA
GGGTTTAAAC ACCCCGATGA ATTTTCTGGT GCCACCATTC TGGGCAATGG CACCGTTGCC
CTGATTATTG ATCTTTCCAA GATTGTGCGT CTGGCCGAGC AGCACGAAAT GACCGGCACC
AACGGCTAA
 
Protein sequence
MEIDTSAFTE EAYELLSELE DSLLVLEENP QDMELIGRVF RAMHTIKGSG AMFGFDEVAE 
FTHDVETVFD KAREGAIPVT KELIDLTLAA RDQIRAILDE AGGGAPSDKQ NAQRIILGLR
ALIPGNTARA PQPANEEPEP IEASSESAAG KHTYRVRFKP DANIFMSGTN PLLLIEELIE
LGSCKVVGIT DALPPLSEIN PEQCHTSWEI FLTTDQGESA IQDVFIFVED ECELNIRRID
RDEDVDDQAQ IKRLGDLLVE RGDIDKQTLE SITDPLGDRL VKAGLVSKGK VDAALIEQQV
VKEKQQTNKV QEQAASVRVP SDKLDQLVDL VGELVTVQAR LNQTAHSHGD HDLQLIAEEV
ERLTAELRDN TMSIRMLAIG TTFNKFKRLV RDLSKELGKQ IELTTAGAET ELDKNVIDQL
NDPLVHIIRN SIDHGVESPQ QRQAVGKPAA GTVHLSAEHS GANVLIRITD DGAGLDPKKL
RTKAVEKGQL PADNELTDKE AYQLIFGAGF STAAKITNVS GRGVGMDVVR KSIDSLRGSV
EVDSTLGQGT SITLKLPLTL AIIEGLLVQI HDEYFVLPLA AVEECVELTR TDVANTHGRQ
VINVRGHIVP YIRLRDRFEI SGPAPDVEQI VISEVEGQQM GFVVDHVIGQ HQTVIKSLGK
GFKHPDEFSG ATILGNGTVA LIIDLSKIVR LAEQHEMTGT NG