| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0588 |
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| Symbol | |
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| ID | 4481788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 711525 |
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| End bp | 712373 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639721331 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_864515 |
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| Protein GI | 117923898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.620562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCAC ACAGTAACGC CTTTAGTGTG GATGTGGAGG ACTACTTTCA GGTGTGTGGT
TTTGAACCCT GGATTGGTCC CGAGCAATGG TCAAGCTTTA CGCCACGGGT GGAGGCCAAT
ACCGAACGCC TGTTGGGGCT GCTGGATGAG GCGGGGGTGC AGGGGACCTT TTTTACCCTG
GGCTGGGTAG CGGAGCGCTT TCCCCAACTG GTGCGGCGCA TCGTGGCTCA GGGGCATGAG
CTGGCCAGCC ATGGCTACAG CCATGTGCGG GTGGATCGGC AAGATGCCGC CCATTTTCGC
CAGGATGTGC TGCGCACCAA ACATCTGCTC GAAGATGTGG GGGGGGTGCC GGTGGTGGGG
TACCGGGCGT CCACCTACTC CATTCACGCG CAAACCCTGT GGGCACTGCC CATTCTTAAA
GAGACGGGGC ATCACTATAG CTCCAGCATC TATCCCATCG CCCACGATCT GTATGGCATG
CCCGAGGCAC CCCGTTTTGC CCATAAACCC CATCCGCAAG GGGTGGTGGA GATTCCTCCC
GCGACGGTGG TGTGGGGGGG GCGGCGTTTT CCGTGTGGGG GTGGGGGCTG GTTTCGGTTG
CTGCCCTATG GGGTAAGCCG CTGGGCGTTG CAGCGGGTGA ACGGGCATGA CCAGCAGTCG
GTGGTCTTTT ATTGCCACCC CTGGGAGGTG GACCCCCAGC AGCCGCGGGT GGCCGGGGTG
GGGTGGAGAT CGCGCTTTCG ACACTATCTT AATCTGCATC GCACCGAACC CCGGCTTAAA
GCACTGTTGC AGGATTTTAG CTGGGACCGT ATGGATCGGG TCTTTGCCCA GGAGATTGCC
CATGGCTAG
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| Protein sequence | MSPHSNAFSV DVEDYFQVCG FEPWIGPEQW SSFTPRVEAN TERLLGLLDE AGVQGTFFTL
GWVAERFPQL VRRIVAQGHE LASHGYSHVR VDRQDAAHFR QDVLRTKHLL EDVGGVPVVG
YRASTYSIHA QTLWALPILK ETGHHYSSSI YPIAHDLYGM PEAPRFAHKP HPQGVVEIPP
ATVVWGGRRF PCGGGGWFRL LPYGVSRWAL QRVNGHDQQS VVFYCHPWEV DPQQPRVAGV
GWRSRFRHYL NLHRTEPRLK ALLQDFSWDR MDRVFAQEIA HG
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