Gene Mmc1_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0456 
Symbol 
ID4483959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp547229 
End bp547726 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content54% 
IMG OID639721203 
Productthioredoxin 
Protein accessionYP_864387 
Protein GI117923770 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGAT CGTTATTTTT TGAGCTCTCA GTCGGAAATC TAGAGATGAG CGAGTCACTT 
ATAGCTACCT GTGCCGGTTG CGGTACCGGC AACCGTATTC CCACCAACAA GGCGGGCTTT
AATGCCCGTT GCGGCAAGTG TGGCGAGCCC CTTAACCGGG TCGGCCCCGA TTTTCCCGTA
ACGGTGGGCG AGCTTCAGTT TCATGACGAG GTATTACACT CGCCTATGCC GGTACTGGTG
GATTTTTGGG CGCCATGGTG TGGTCCGTGT CGGCAGATGT CGCCCTTACT GGCGGATTTT
GCCCGTGAGA TGGCCGGACG CATCAAAGTC GTTAAGGTCA ATACCGACGA TAACCGCATC
CTCGCCAACC AATTTAACAT TCGTTCCATC CCCACCCTCA TGCTGTTCGA TCATGGTCAG
TTGAAGGATC AGGTCTCTGG CTCCATGACG CTGCCTGCGT TGCGGGATTG GATTAACCGC
ATTTTGGAGA TCTCTTGA
 
Protein sequence
MPRSLFFELS VGNLEMSESL IATCAGCGTG NRIPTNKAGF NARCGKCGEP LNRVGPDFPV 
TVGELQFHDE VLHSPMPVLV DFWAPWCGPC RQMSPLLADF AREMAGRIKV VKVNTDDNRI
LANQFNIRSI PTLMLFDHGQ LKDQVSGSMT LPALRDWINR ILEIS