| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0420 |
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| Symbol | |
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| ID | 4480904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 498745 |
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| End bp | 500403 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721168 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_864352 |
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| Protein GI | 117923735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA TCACCAATCG CCGTTCTACG CGCCTCTTGG CGGCGCTCTC TGCGTTGGCG
CTGCTTTCTG CCTGTTCCGT GAAACCGACG CCGTTCACCC AGGCGGAGTT CGCCGCTCAG
GCTAAAGCGG ACCGCACCGC CATGTTCCAG GGGCAGCAAG CTGTGACAAC GCCCCTGACC
TTGAATGAGG CCGTTGCCCG GGTTCTGAAA TATAACCTGG ATAAGCGCTC CAAGATGATG
GACGAAGCCT TGGCACTGGG GCAGACCTAC CTGGATCGGT ACGACCTGCT GCCCAAGCTG
GAAATCAATG CGGGCCATAC TGAACGTTCG GAAATCAACG CCACGCGTTC GCGGGACCTT
GTAACCCAAA CCACCACCGC GAACCCGACC TATTCAGAGG ACCGCTCCTC AACCACAGCC
GACTTGGGGC TCACTTGGAA CATTTTGGAT TTTGGTGTGA GTTATTTCAC AGCGCACCAA
AACGCTGACC GCGCTTTGAT CGCCCAGGAA AAACGCCGTA AGACCATCAA CAATCTGGTG
CAGGAGGTGC GTTTCACCTT CTGGCGTGCC GCCGCTGCGC AAAATTTAAA AACCCGTGTC
AGTCAAGTCA TTGCCACGGC AGAATCGGCC TTGCAAGATT CTGAGCGGGT CGAGGGGGAA
CGCCTGCGTA ACCCTATAGA ATCCCTGCGT GTTCAGAAAA CCATGCTGGA AAGCATCCGT
CAATTAGAAG CCATCGACCA AGAGCTGAAT GCGGCTAAGG CCGAGTTGGC GGCGTTGATC
AACCTGCCAC CTGGCAGCGA TTTTCAGCTT GATGTACCTA GCAACGATGG TATGGCCATT
CCCGAATGGC CTCTCTCTGT CGAGGAGATG GAAGAGGCGG CCATGGTCAA CAACCCTGAC
CTGCGTGAGC AGGGTTACCA AAGCCGCATC GCCCTTGATG ACACCCGTAA AGAGATCTTA
AAACTGCTGC CCGGTATAAC GCTGTCGTTC TCCCGGCAGT ACGATTCCAA CTCCTTTATG
GTGGACAATC GTTGGAACGA TGCAGGTGCC AAGGTGACAT GGAACCTGCT TAACTTACTT
TCGGGTCCAG ACCGTATCGC CCATTCGGAG AGTGTCGAGA AGCTTGCCGA AGTGAAGCGT
CTTGCCTTGC GCATGGCGGT ATTGGCTCAG GTGCATGTAG TCTCGCACCA GTTTGCCAGT
GCCTCAAAAC AGTTTGAACG CGCCCACAAG CTGTGGACCA TAGAGCGGCG TTTGGCCGAG
GCGGCTGGCA ATCAAAGCCG GGGCGGAACC GTCAATGAAA TTGAGCGTAT CAGCACGGAG
ACATCGGCCA TTGCAGCTGA ATTGCGGCGT TACCAGACCT ATGCACAGGT GCAGTTATCC
TACGGCAAGC TCCAAGCTAC CATCGGGGCC GATCCGGTTC CAGAGCGGCT GGCTTCCCAT
GCGTTGGACG GCATTGCGGG TGCCATTGTG TTAGATCCCG TGGGGGGAAC GCAACATGTT
CTGGCGGAGG ATGATCTCTT TCGTCAGCAG GATCCGACCC ATACTGTTCG GGATGAGAAT
GCCGAGCCGC TCGCCGACGC CGACGCCCAC ACCGGTGCGG CCCTGAGCTG GTTGGAGGAT
TCCACCAGCA AAGCGATCAA AACGGAGGGG CATGAATGA
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| Protein sequence | MTTITNRRST RLLAALSALA LLSACSVKPT PFTQAEFAAQ AKADRTAMFQ GQQAVTTPLT
LNEAVARVLK YNLDKRSKMM DEALALGQTY LDRYDLLPKL EINAGHTERS EINATRSRDL
VTQTTTANPT YSEDRSSTTA DLGLTWNILD FGVSYFTAHQ NADRALIAQE KRRKTINNLV
QEVRFTFWRA AAAQNLKTRV SQVIATAESA LQDSERVEGE RLRNPIESLR VQKTMLESIR
QLEAIDQELN AAKAELAALI NLPPGSDFQL DVPSNDGMAI PEWPLSVEEM EEAAMVNNPD
LREQGYQSRI ALDDTRKEIL KLLPGITLSF SRQYDSNSFM VDNRWNDAGA KVTWNLLNLL
SGPDRIAHSE SVEKLAEVKR LALRMAVLAQ VHVVSHQFAS ASKQFERAHK LWTIERRLAE
AAGNQSRGGT VNEIERISTE TSAIAAELRR YQTYAQVQLS YGKLQATIGA DPVPERLASH
ALDGIAGAIV LDPVGGTQHV LAEDDLFRQQ DPTHTVRDEN AEPLADADAH TGAALSWLED
STSKAIKTEG HE
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