Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0164 |
Symbol | |
ID | 4481544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 178991 |
End bp | 179488 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639720909 |
Product | NusB antitermination factor |
Protein accession | YP_864097 |
Protein GI | 117923480 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATA AATCGGACAA GTCGGGCAAA TCCCGCAACA CCATGCGTCG GGGTGGACGC AGCAAATCTC GTGAGATTGC CTTACAGGTA TTGTATGGCT GTGAGATTGC CCATGATCCG GTGGGGCCAG CGCTACGGAA TATGCTGGAG GATCCGCATT CGGAGGGGAT GGATCAGGAT TATTTTAGCC AGCTGACGTT GGGGGTTGAG GCCGAGCGGG AGGTTTTGGA TAGCTGGATT GGGCGTGCGG GTGCGGCTTG GTCGATGGAT CGTTTTTCGG TGGTGGACCA TAATATTTTA CGGTTGGGTA TTTATGAGTT ACTCAAGCAG CCGGAGGTAC CGCATCGGGT GATCCTTAAC GAGGCGATTG AGTTATCCAA GCGTTTTGGT GGGGAGGAGT CCAGCCGTTT TGTTAACGGT GTGATGGACA AGGTCGCCAA TTTGGTACGT GAAGAAGATG CTGCGCCTAT GCGGGTGTGG GATACACAGG AGTCCTAG
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Protein sequence | MAHKSDKSGK SRNTMRRGGR SKSREIALQV LYGCEIAHDP VGPALRNMLE DPHSEGMDQD YFSQLTLGVE AEREVLDSWI GRAGAAWSMD RFSVVDHNIL RLGIYELLKQ PEVPHRVILN EAIELSKRFG GEESSRFVNG VMDKVANLVR EEDAAPMRVW DTQES
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