Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0005 |
Symbol | |
ID | 4480632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 5220 |
End bp | 5909 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639720751 |
Product | hypothetical protein |
Protein accession | YP_863940 |
Protein GI | 117923323 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02646] conserved hypothetical protein TIGR02646 |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCACG TCAAACACAC AGCGTCTCTC ACCAAGCTAG ACCGTGCAAA GACTAAAGAT CCTTGCCCGA CAGATCCAGC AAAAGCTTGG AGAGGCTTTA AACATAAAGA CGATGTGGCC AAACAACTTA AACTCCTGCA AGACGGCCTT TGTGCCTACT GTCAAGTGAG TTTGGACACG GAGCTTGGCT ACCATATCGA TCATATTCAG CCAAAGGGTC CCAACCCTAA GCAAACTTTT GTCTGGCACA ATCTGGTACT CTCTTGCATA GCAAGTGGAT CCCAAGGTGC GGTGAGCGGA AAGCTCAGTT GTGGTCACGC TAAAGGCAAT CAAGCGTTAC CTAAGGATAT GGACCCCACG CACCCTGACT GTGAATCACT CTTTACGTAC ACCCTTTCGG GTAAGGTTGA GCCCAATCCA GATCGCCCCC CCGAGCAGGT GGAGGACATT AAAAAAGCGA TCGAATTGTT GAACCTCAAC AACAAACGGC TGGTTCGCGA GCGGGCCGAG ATGTTGCATG AAGGTTATCT ATGTTTAAAA GATCTTAACG GGAGTGCCGT TGCCCATTTC CTGGATTTGG AACTGGGAAA AACCAACGGA AAACACAGGG CATTTATCAC GGCCCGCAAA CTGCACTTTC AAGATTGGCC ACACGTTGAG CCCATCGACA ACACGCTTGA AGAGAGATGA
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Protein sequence | MRHVKHTASL TKLDRAKTKD PCPTDPAKAW RGFKHKDDVA KQLKLLQDGL CAYCQVSLDT ELGYHIDHIQ PKGPNPKQTF VWHNLVLSCI ASGSQGAVSG KLSCGHAKGN QALPKDMDPT HPDCESLFTY TLSGKVEPNP DRPPEQVEDI KKAIELLNLN NKRLVRERAE MLHEGYLCLK DLNGSAVAHF LDLELGKTNG KHRAFITARK LHFQDWPHVE PIDNTLEER
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