| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0260 |
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| Symbol | |
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| ID | 5328728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 272696 |
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| End bp | 274174 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640792781 |
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| Product | (R)-citramalate synthase |
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| Protein accession | YP_001329481 |
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| Protein GI | 150402187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0093381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAACA TATTCGATAC TACATTAAGG GATGGAGAGC AAACTCCAGG AGTTTCGCTA
TCCCCGAGTG AAAAACTTGA AATAGCAATA AAACTCGATG AACTTGGTGT AAATATTATC
GAGGCAGGTA GTGCGATAAC CTCAAAAGGC GAAAGAGAAG CAATAAAACT TGTTGCTGAA
CAGAAACTAA ATGCTGAAAT ATCATCATTT GTTAGAGCTC TTCCTGTAGA CATTGATGCT
GCGCTTTCTT GCAATGTAGA TAGCGTTCAT TTAGTTGTTC CTACATCAGA CCTTCATATG
GAATACAAAC TCAGAAAAAC CCGTGAAGAA AACTTAAAAG ATGCAATGCA CGCTGTAGAC
TATGCTAAAG AACATGGTTT AATTGTTGAA CTTTCGGCAG AAGACGCTAC AAGAAGCGAT
GTAGAATTTT TAAAAGAACT TTTCAAAAAA GGGGAAGAGT TAAAAGCGGA CAGAATTTGT
TTGTGCGATA CTGTTGGTAT TTTAACACCT GTAAAATCCA TGGAACTTAT AAAAACAATG
AAAGCCGCAG TGACAATTCC AATTTCAATC CACTGTCACA ACGATTTTGG AATGGCTACT
GCAAATACGC TTTCCGCAAT AAGTGCTGGT GCAGACCAGT GCCACGTTAC AATCAATGGT
ATTGGTGAAA GAGCAGGAAA CGCATCATTA GAAGAAGTGG TTATGAGTTT AAAGTCACTT
TATGATATGG AAACGAATAT TCAAACCGAA AAGCTATACA AAATCTCGAG AATTGTTTCA
AAATACATGA AACTTTCAGT TCCTGCAAAC AAAGCACTTG TCGGTGACAA TGCATTTGCC
CATGAAGCGG GAATTCACGT AGATGGCCTC ATGAAAAGCA CTGAAACTTA TGAACCAATA
GGTCCAGAGG TAGTCGGTAA CAGAAGAAAA ATCATACTTG GAAAACACAG TGGAAAAGCT
GCTTTAAAAT ATAAATTAGA ATTAATGAAC ATTGGATTAA GCCACGAACA GTTTGAAGAA
GTTTATTCAA AAATTAAAGC ATTTGGCGAT CTTGGAAAAT ACATCAGCGA TGTAGATTTA
AAAACAGTAA TAAGCCAGGT TCAGGGTGTT GAACTCGAAA GAAAAGTAAT TCTCGATGAG
ATTACGGTGA TGTCTGGAAA CAAGGTATCT CCTCTTGCAT CAATAAATTT AAAATTTGCA
AACGACTGCA ATATCAAAGA CAATATCAGA GAAGCCGCAT ACGGTCTTGG TCCGGTTGAT
GCTGCAATAA ATGCAGTTAA AAAAGCACTT ACAGGTGTTG CTGACATTGA ACTTGAGGAT
TACAGCGTTC GTGCGATGAC TGGAGGTACT GATGCTTTAA TCGAAGTAGT CGTACATTTA
AGAAAAGGAA ACGAAGTTGT TGAAGTCAGA AAAGCGCACG GAGACGTTGT CATGGCATCA
GTTGAAGCTA TGATGGATGG AATTAATTTA TTGATTTAA
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| Protein sequence | MVNIFDTTLR DGEQTPGVSL SPSEKLEIAI KLDELGVNII EAGSAITSKG EREAIKLVAE
QKLNAEISSF VRALPVDIDA ALSCNVDSVH LVVPTSDLHM EYKLRKTREE NLKDAMHAVD
YAKEHGLIVE LSAEDATRSD VEFLKELFKK GEELKADRIC LCDTVGILTP VKSMELIKTM
KAAVTIPISI HCHNDFGMAT ANTLSAISAG ADQCHVTING IGERAGNASL EEVVMSLKSL
YDMETNIQTE KLYKISRIVS KYMKLSVPAN KALVGDNAFA HEAGIHVDGL MKSTETYEPI
GPEVVGNRRK IILGKHSGKA ALKYKLELMN IGLSHEQFEE VYSKIKAFGD LGKYISDVDL
KTVISQVQGV ELERKVILDE ITVMSGNKVS PLASINLKFA NDCNIKDNIR EAAYGLGPVD
AAINAVKKAL TGVADIELED YSVRAMTGGT DALIEVVVHL RKGNEVVEVR KAHGDVVMAS
VEAMMDGINL LI
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