Gene MmarC6_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1817 
Symbol 
ID5737523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand+ 
Start bp1706076 
End bp1706663 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content31% 
IMG OID641284317 
ProductTetR family transcriptional regulator 
Protein accessionYP_001549860 
Protein GI159906198 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGAA ATCTGATTCT TGAAAAATCA AGAGAACTAT TTTTAAAAAA AGGATATGCT 
GAAACATCAC TTTTGGAAAT TGCAAAAGAA TGCAATATTT CAAAAAGAGG ATTGTATTAC 
CATTTTGAAA AAAAGGAGGA TTTGTACATC GAGACAATAA ACTCGATACT GGCAGAAAAT 
GGAAAAGCTG TTTTAGCATG CATTGAAAAA GAAACCTGCT TTAAAAACAC AATTTTTGAA 
TTTATAGAGC AGGCCATCGC AATAAGAAAT AGGTATTTTA GTAATTATAA TAATGACGTT 
AAAAAAACAG TATATTTCGG ACCGATCTCT GACGCAATAA AAAATTTTCC TGAAATTTGG 
GAATTCAATA ATAATATATA CGAAAACGCA ATAGGGAAAA TGGTTAACAG AATAATCTTG 
GCACAAGAAA TGGGGGAGGT TAAAAAAGAA TTGGATCCCC GTTCTCTTGC ATTTCATTTC 
TGCTCGATAT TTGAAGGACT ACCTCTTGTT TCATATTACA CTAACAAAAA ATTTGATGAT 
AAGGCCAGAA TGGTAATCAG TTCATTTTGG GAACTTATAA AGAACTAA
 
Protein sequence
MTRNLILEKS RELFLKKGYA ETSLLEIAKE CNISKRGLYY HFEKKEDLYI ETINSILAEN 
GKAVLACIEK ETCFKNTIFE FIEQAIAIRN RYFSNYNNDV KKTVYFGPIS DAIKNFPEIW 
EFNNNIYENA IGKMVNRIIL AQEMGEVKKE LDPRSLAFHF CSIFEGLPLV SYYTNKKFDD 
KARMVISSFW ELIKN